Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi213g00065 ATGTCCCTCCTTTCACCACACCCTAACATCCTTCAAATTTTTGATGTTTTTGAAAACGACGACGTTTTATCCATCGTCCTTGAGCTCTGCAAGCCTCTAACCCTTCTCGACCGCATCGTCGCTAACCCTAACCCTCTTTCCGAGCCTCAAGCCGCTTCCCTTATAAAGCAGCTTCTAGAAGCCGTCGCACACTGCCACCGCCTCGGCGTGGCGCACCGTGATATCAAGCCTGATAATATCCTCTTTGACTCTGCTGATAATCTGAAACTCGCTGATTTTGGTTCCGCTGAGTGGTTCGGCGACGGGAGGAGCATGAGCGGAGTGGTTGGAACGCCGTATTACGTGGCGCCGGAGGTTCTGATGGGAAGGGATTATAACGAGAAGGTTGATGTTTGGAGTTGTGGTGTGATATTGTACATAATGTTGGCTGGAATTCCACCGTTTTATGGAGATTCTGCGGTTGAGATTTTTGAAGCTGTTGTTAGGGCTAATCTAAGGTTTCCTTCTAGAATCTTCCGATCTGTTTCCCCTGCTGCTAAGGATCTCTTGCGCAAGATGATCTGCAGGGACAGTTCCACGAGAATATCCGCAGAGCAAGCCTTGAGACACCCTTGGATCTTGAGTGGTGGTGACATGGCTAATGTGAATTGA 651 0.49 MSLLSPHPNILQIFDVFENDDVLSIVLELCKPLTLLDRIVANPNPLSEPQAASLIKQLLEAVAHCHRLGVAHRDIKPDNILFDSADNLKLADFGSAEWFGDGRSMSGVVGTPYYVAPEVLMGRDYNEKVDVWSCGVILYIMLAGIPPFYGDSAVEIFEAVVRANLRFPSRIFRSVSPAAKDLLRKMICRDSSTRISAEQALRHPWILSGGDMANVN 216
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi213g00065 216 CDD STKc_CAMK 7 205 - -
Sebi213g00065 216 SMART serkin_6 1 206 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi213g00065 216 ProSiteProfiles Protein kinase domain profile. 1 206 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi213g00065 216 ProSitePatterns Serine/Threonine protein kinases active-site signature. 70 82 IPR008271 GO:0004672|GO:0006468
Sebi213g00065 216 Pfam Protein kinase domain 4 206 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi213g00065 216 Gene3D Transferase(Phosphotransferase) domain 1 38 214 - -
Sebi213g00065 216 Gene3D Phosphorylase Kinase; domain 1 1 37 - -
Sebi213g00065 216 SUPERFAMILY Protein kinase-like (PK-like) 3 208 IPR011009 -
Sebi213g00065 216 FunFam Phosphoenolpyruvate carboxylase kinase 1 33 215 - -
Sebi213g00065 216 PANTHER SERINE/THREONINE-PROTEIN KINASE 1 207 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi213g00065 Sebi-Chr213 866998 867747 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi213g00065 1 214 EF-hand Containing Proteins AT1G50700 41.935 3.32e-59 191
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Sebi213g00065 Pkinase 3.5e-59 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi213g00065 - K08794 gmx:548089 371.318