Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi213g00034 ATGGAGCCTCACTTTATGGTTCCGCTTCCATTGATGTTCCTAATTACTACTCCTTGGCTTTTCCTGGCTCTCCATGCCAATGCTGAAAGCTCCACATACATAGTTCACATGGACAAGTCCCTAATGCCTCAAGTCTTCACAAGCCATCAAGATTGGTACGAGTCCACCATTCATTCCACAAAGTTAACAACATCAGATGATCATCAGTCCAAGCAATCACAGAAATTAGTGTACACTTACAATCATGCCATGCATGGATTCAGTGCTGTGCTATCCTCAGATGAGTTGGAGACCCTAAAGAAAGTTCATGGCTTTGTCACAGCTTATCCTGACAAGTCTGCCACCATAGACACCACTCACACCTTTGAGTTTCTCTCACTCAACCCCTCCATTGGGCTATGGAATGCATCAAATTTAGGAGAGGATGTCATTGTTGGTGTAATTGACTCTGGTGTCTGGCCTGAGAGTGACAGCTTTAAAGACCATGGCATGACTAACAAAATCCCATCCAAATGGAAAGGAACATGTGAGGCAGGACAAGATTTCAACACCTCCATGTGCAACTTGAAATTAATTGGTGCTAGATATTTCAACAAGGGTGTGATTGCAGCAAATCCTAAAGTCAAAATCAGCATGAACTCAGCTAGAGACACTCAAGGACATGGGAGCCACACATCTTCAACTGTTGCTGGAAACTATGTTAATGGTGCTTCTTTCTTTGGTTATGGCAAAGGGGTAGCAAGAGGAATTGCACCACAAGCTAGGCTTGCCATGTATAAGGTCCTTTGGGATGAAGGACGTGAAGCCTCTGATGTTCTTGCAGGAATGGACCAAGCTATTGCTGATGGGGTTGATGTCATTTCCATCTCTATGGGTTTTGACAGTGTTCCACTTTATGAAGACCCTGTAGCAATTGCTGCTTTTGCAGCAATGGAAAAAGGGGTAGTTGTTTCATCTTCTGCAGGAAATGAAGGTCCTAAACTTGGTACCTTGCACAATGGTATCCCTTGGGTCCTCACAGTGGCAGCAGGTACTATAGACCGTACATTTGGTAGTTTGATACTTGGAAATGGCCAAACCATTGTGGGTTGGACCTTGTTTCCTGCAAATGCCATAGTAGAAAATTTTCCACTTATTTACAACAAGACTCTATCAGCATGCAACTCAGTTAACCTGTTATCTGAAGCTGCTGGAGGAGGGATCATTATATGTGAGGCCTCAGAGTCAGTTTCTGTCTTAACCCAAATCAGTTCTATTTCTGAGGCTAGTGTGGTAGGTGCTGTGTTTATCTCTGAGGATCCAAGATTAATTGAAACAGGAAGATTGTTCTCTCCAAGTATTGTAATCAATCCAAAAGATAGATCATCCCTAATCCACTATGCAAAAAGTGTTGAAAACCCCACTGCCAGCATCAAATTTCAACAAACATTTGTTGGAATAAAGCCAGCACCAGCTACAGCTTATTACACTTCAAGAGGTCCTTCACCTAGCTATCCAGGGGTCTTAAAGCCTGATGTAATGGCACCTGGCTCTAATGTTCTGGCTGCTTTTGTTCCAAATAAATCAGCAGCTAGAATTGGGACAAATGTGTTTTTATCAAGTGGTTACACTTTTCTTTCTGGAACATCCATGGCATGTCCTCATGCATCTGGTGTTGCTGCTCTCTTAAAAGGTGCACACCCTGATTGGAGTGCAGCTGCTATAAGGTCTGCATTAGTCACCACTGCTAATCCACTTGATAATACTCAAAATCCAATTTTGGACAATGGTAACCCATTTCAACATGCTTCACCTCTAGCCATGGGAGCTGGTGAGATTGATCCTAATAGAGCATTGGATCCAGGTTTGATATATGATGCCACCCCACAAGACTATGTTGACCTCCTTTGTGGTTTGGGATACACACACAACCAAATCTTAACTATTACAAGATCAAACTCCTATAACTGTGCAAACCCATCATTTGATCTTAACTACCCTTCATTTATAGCTTTGTATAGTAACAAAACAAGATCAATAGTCCACAAGTTTCGGAGGATTGTGACCAATGTTGGAGATGGTGCTGCTATGTATAGAGTCAAGGTGACACAACCCAAGGGGTCTGTGGTTACAGTGTCACCTGAGACACTAACATTCAGCTATAAGCATGAGAAACAGAGCTACTCTGTTATTATAAAGTACACGAGGCACAAGAAGGAAAATGTCTCATTTGGGGACCTTGTTTGGGTTGAAGAAGGTGGTTCACGCAGTGTTAGGAGCCCCATTGTAGTGGCACCAAGTGAAATTGTTTAA 2292 0.4263 MEPHFMVPLPLMFLITTPWLFLALHANAESSTYIVHMDKSLMPQVFTSHQDWYESTIHSTKLTTSDDHQSKQSQKLVYTYNHAMHGFSAVLSSDELETLKKVHGFVTAYPDKSATIDTTHTFEFLSLNPSIGLWNASNLGEDVIVGVIDSGVWPESDSFKDHGMTNKIPSKWKGTCEAGQDFNTSMCNLKLIGARYFNKGVIAANPKVKISMNSARDTQGHGSHTSSTVAGNYVNGASFFGYGKGVARGIAPQARLAMYKVLWDEGREASDVLAGMDQAIADGVDVISISMGFDSVPLYEDPVAIAAFAAMEKGVVVSSSAGNEGPKLGTLHNGIPWVLTVAAGTIDRTFGSLILGNGQTIVGWTLFPANAIVENFPLIYNKTLSACNSVNLLSEAAGGGIIICEASESVSVLTQISSISEASVVGAVFISEDPRLIETGRLFSPSIVINPKDRSSLIHYAKSVENPTASIKFQQTFVGIKPAPATAYYTSRGPSPSYPGVLKPDVMAPGSNVLAAFVPNKSAARIGTNVFLSSGYTFLSGTSMACPHASGVAALLKGAHPDWSAAAIRSALVTTANPLDNTQNPILDNGNPFQHASPLAMGAGEIDPNRALDPGLIYDATPQDYVDLLCGLGYTHNQILTITRSNSYNCANPSFDLNYPSFIALYSNKTRSIVHKFRRIVTNVGDGAAMYRVKVTQPKGSVVTVSPETLTFSYKHEKQSYSVIIKYTRHKKENVSFGDLVWVEEGGSRSVRSPIVVAPSEIV 763
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi213g00034 763 Pfam Peptidase inhibitor I9 32 114 IPR010259 -
Sebi213g00034 763 PRINTS Subtilisin serine protease family (S8) signature 140 159 IPR015500 -
Sebi213g00034 763 PRINTS Subtilisin serine protease family (S8) signature 540 556 IPR015500 -
Sebi213g00034 763 PRINTS Subtilisin serine protease family (S8) signature 217 230 IPR015500 -
Sebi213g00034 763 Pfam Subtilase family 140 584 IPR000209 GO:0006508|GO:0008236
Sebi213g00034 763 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 33 757 IPR045051 -
Sebi213g00034 763 ProSiteProfiles Serine proteases, subtilase domain profile. 121 612 - -
Sebi213g00034 763 ProSitePatterns Serine proteases, subtilase family, serine active site. 541 551 IPR023828 -
Sebi213g00034 763 Pfam Fibronectin type-III domain 656 757 IPR041469 -
Sebi213g00034 763 SUPERFAMILY Subtilisin-like 117 616 IPR036852 GO:0004252|GO:0006508
Sebi213g00034 763 FunFam Subtilisin-like protease SBT1.5 142 355 - -
Sebi213g00034 763 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 22 116 IPR037045 -
Sebi213g00034 763 CDD Peptidases_S8_3 115 577 IPR034197 -
Sebi213g00034 763 Gene3D - 347 478 - -
Sebi213g00034 763 FunFam Subtilisin-like protease SBT1.9 22 117 - -
Sebi213g00034 763 Gene3D Peptidase S8/S53 domain 142 625 IPR036852 GO:0004252|GO:0006508
Sebi213g00034 763 CDD PA_subtilisin_like 352 471 - -
Sebi213g00034 763 Gene3D - 629 759 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi213g00034 Sebi-Chr213 477708 479999 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi213g00034 21 762 Subtilisin-like Serine Gene Family AT5G67090 41.492 0.0 541
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi213g00034 - - gmx:100806072 1269.22