Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi213g00023 ATGGAGAACTCAAAGAATAACGACACCAACAATGGAGAGTTTGCGGCCAAACGGAGAACTAATAACGGGGGAATCGATTTCGATTTGAATGAAGAGCCTCCTCCTTCTCCTATCCATATCATGCTCCCTAATTCTCACTCTCAGGTTTCTGCTGATGGTTGCCACATGGCGATGGGAGGGTTTATATACTTGGAGGAACCTAATCATGAATTTTCATTCTCCACTAAAGGAGATGCTACAAGAGATAGCAATGAATACAGTGATGCGAAAATGGTGAAGGATGCAACTATTGATGTTGGTAATAATAAGGGTAAGGGTAAGATGCCAATGTATTGTTTTGAGTCAGGAGAAAAGGATGCAAATGTGAATGAGGTCTCCAATAATCCTCCTTTATCAACTGATGGTGGCAATTTCAAAACTCTGTCTTCGTCTGAGGTGGAGGTCGTTCCAGATCCTTCTTTTACACCTGCTAGCGAAAATTGCGATGATGAAGGTAACAGAGTTACTGAAGGAAACATATCACTTCAAGAGGAGAATAATGTTGTTGTTGATGCTGCTGATGAGGAATCTGGGTCTAAAAGGCCGAGGAGGAAGCTAAGTGATGAAAGAGTAGTAGTCGAACTTGAGAGCCGAATGGACATACCGGATGATGGTTATCGCTGGCGTAAGTATGGACGCCAGATTATCAAAGGAGGTTACCTTAGGAGCTACTACAGGTGCTCGAATAATGGATGTAGTGTAAGGAAACAGATGGAAAGGGATTTAAGTAATTCAAGATATGTAAAAACAACATATGATGGAAGGCATAATCATGAAGTGCCAATTAGCAGCGGTAGAATCATTAACCGGCCACCCATAATTAAGCCAAAACCCCGAACTATTAGGGAAGAGATTGAAGCTGCCAATGCCATGGTCACTTTTGCAATACCACTTGGGACTGCAAGGCTGCCTAGGCCCACACCCCCTCCACTTTAA 975 0.4287 MENSKNNDTNNGEFAAKRRTNNGGIDFDLNEEPPPSPIHIMLPNSHSQVSADGCHMAMGGFIYLEEPNHEFSFSTKGDATRDSNEYSDAKMVKDATIDVGNNKGKGKMPMYCFESGEKDANVNEVSNNPPLSTDGGNFKTLSSSEVEVVPDPSFTPASENCDDEGNRVTEGNISLQEENNVVVDAADEESGSKRPRRKLSDERVVVELESRMDIPDDGYRWRKYGRQIIKGGYLRSYYRCSNNGCSVRKQMERDLSNSRYVKTTYDGRHNHEVPISSGRIINRPPIIKPKPRTIREEIEAANAMVTFAIPLGTARLPRPTPPPL 324
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi213g00023 324 SMART WRKY_cls 215 273 IPR003657 GO:0003700|GO:0006355|GO:0043565
Sebi213g00023 324 MobiDBLite consensus disorder prediction 1 33 - -
Sebi213g00023 324 MobiDBLite consensus disorder prediction 1 17 - -
Sebi213g00023 324 SUPERFAMILY WRKY DNA-binding domain 210 274 IPR036576 GO:0003700|GO:0006355|GO:0043565
Sebi213g00023 324 Gene3D WRKY domain 200 275 IPR036576 GO:0003700|GO:0006355|GO:0043565
Sebi213g00023 324 ProSiteProfiles WRKY domain profile. 210 274 IPR003657 GO:0003700|GO:0006355|GO:0043565
Sebi213g00023 324 Pfam WRKY DNA -binding domain 216 272 IPR003657 GO:0003700|GO:0006355|GO:0043565
Sebi213g00023 324 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 123 278 IPR044810 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi213g00023 Sebi-Chr213 339943 342004 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi213g00023 114 276 WRKY Transcription Factor Family AT5G56270 37.838 6.70e-24 100
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Sebi213g00023 WRKY 1.8e-18 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi213g00023 K18835 - rcu:8274294 124.405