Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi213g00022 ATGGAGAACTCAAAGAATAACGACACCAACAACGGAGACTTTGCGGCTTTCTCTGCCAAACAGAACGGGAGAATCGATTTTGATTTGAATGAAGAGCCTCCTTCTTCTCCTATCCATATCATGCTTCCTAATTCTCACTCTCAGTCAGAAGAAAAGGATGCAAATGTGAATGAGGTCTCTAATAGTCCTCCTTTATCAACTGATGGTGGCAATTTCAAAACTCTGTCTTCGTTTGATGATGATGAGGTGGAGGACATTCCAGATCCTTCTTTTACACCTGCTGGCCAACAAGGTAACGGAGTTACTGAAGGAAACATATCACTTCAAGATGAGGAGAATGTTGTTGTTGATGCTGCTGCTGATGAGGAATCTGGGTCTAAAAGGAAGAGGAAGAGAGAGAGCAAGCTTGTGAAATACAACAAGAGGCCGAGGAGGAACATTGATCAAAGAGTAGTAGTCCAACTTGAGAGCCGCATGGACATACTGGATGATGGTTATCGCTGGCATAAGTATGGACGCAAGAATATCAAAGGACGTCCATGCCTTAGGTGCTCGAATAATGGATGTAGTGTAAGGAAACAGGTGGAAAGGGATGTAAGTAATTCAAGATGTGTAAAAACAACATATGATGGAAGGCATAATCATGAAGTGCCAAGCAACACTAGAATCATTAACCCTGCACCCATAATTAAGCCAAGACCCAGAACTATTAGGGAAGAGATTGAAGCTGCTAATGCCGTGGTCACTTTTGCAATACCACCTGGGACTGCATGGCTGCCTAGGCCTACACCTCCACTTCATGGTCATGGTGATGGATCTTCTTCCTCTGCATGCCAAATGCCCCATTCATTGTTGCCTTATGGTAATAGTAATACCACTCTGCAAGGTGGATCCAGCTGTCCCTCATCAGTGCTTCCTGGTTTTCGTCCATTTGATAATATCTCATCTGATCAGCAGGGTAGAGTTCATAGCAATAGGACCAGTTCAGTTTTTCCCTTTAGAGCAAAACCTGCTGAAGGTGATCACTGGAATGGATGA 1038 0.4374 MENSKNNDTNNGDFAAFSAKQNGRIDFDLNEEPPSSPIHIMLPNSHSQSEEKDANVNEVSNSPPLSTDGGNFKTLSSFDDDEVEDIPDPSFTPAGQQGNGVTEGNISLQDEENVVVDAAADEESGSKRKRKRESKLVKYNKRPRRNIDQRVVVQLESRMDILDDGYRWHKYGRKNIKGRPCLRCSNNGCSVRKQVERDVSNSRCVKTTYDGRHNHEVPSNTRIINPAPIIKPRPRTIREEIEAANAVVTFAIPPGTAWLPRPTPPLHGHGDGSSSSACQMPHSLLPYGNSNTTLQGGSSCPSSVLPGFRPFDNISSDQQGRVHSNRTSSVFPFRAKPAEGDHWNG 345
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi213g00022 345 MobiDBLite consensus disorder prediction 1 111 - -
Sebi213g00022 345 MobiDBLite consensus disorder prediction 1 17 - -
Sebi213g00022 345 MobiDBLite consensus disorder prediction 312 331 - -
Sebi213g00022 345 MobiDBLite consensus disorder prediction 310 345 - -
Sebi213g00022 345 Gene3D WRKY domain 146 219 IPR036576 GO:0003700|GO:0006355|GO:0043565
Sebi213g00022 345 Pfam WRKY DNA -binding domain 163 216 IPR003657 GO:0003700|GO:0006355|GO:0043565
Sebi213g00022 345 MobiDBLite consensus disorder prediction 262 284 - -
Sebi213g00022 345 MobiDBLite consensus disorder prediction 40 74 - -
Sebi213g00022 345 MobiDBLite consensus disorder prediction 92 109 - -
Sebi213g00022 345 ProSiteProfiles WRKY domain profile. 157 218 IPR003657 GO:0003700|GO:0006355|GO:0043565
Sebi213g00022 345 MobiDBLite consensus disorder prediction 269 284 - -
Sebi213g00022 345 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 55 222 IPR044810 GO:0003700
Sebi213g00022 345 SUPERFAMILY WRKY DNA-binding domain 156 218 IPR036576 GO:0003700|GO:0006355|GO:0043565
Sebi213g00022 345 SMART WRKY_cls 162 217 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi213g00022 Sebi-Chr213 327906 330916 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi213g00022 76 219 WRKY Transcription Factor Family AT5G56270 40.541 1.90e-22 96.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Sebi213g00022 WRKY 7.6e-14 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi213g00022 K18835 - mof:131154508 126.716