Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi212g00045 ATGTTAAAAGCAGTAGCATCTGGGGTGTTGATTACCTCTATCCTCATATGTGCATCTGCAACAGATAATGGATTTCCTAGATGTAACTGTGATGATGAGGCTAGCTTGTGGACTATTGAGAGCATTCTGGAGTGTCAGAGAGTTGGGGATTTCTTGATTGCTGTGGCCTACTTCTCCATCCCTATTGAGCTGCTTTATTTTATCAGTTGCTCAAATGTCCCATTCAAATGGGTCCTTGTTCAGTTCATTGCCTTCATTGTACTGTGTGGATTGACACATTTGCTGAATGGGTGGACTTATGGCCCTCACACTTTTCAGCTTATGGTGGCACTTACTGTCTTTAAAATTCTCACTGCCTTGGTATCTTGTGCCACTGCTATAACTCTCATCACTCTAATTCCTTTACTTCTTAAAGTGAAGGTCAGAGAATTCATGCTGAAGAAAAAGACATGGGATCTTGGACGGGAGGTTGGTATTATTATGAAACAGAAGGAGGCTGCAATGCATGTAAGAATGCTTACTCAAGAGATTCGCAAGTCACTTGATAGACATACCATTCTGTACACCACTTTGGTGGAGCTGTCTAAAACACTTGGCTTGCAAAATTGTGCTGTGTGGATGCCTAATGTTGAGAAGACAGAGGTGAACCTCACTCATGAATTGAACGAGAGGAATTTTAATTGTTCCATACCCATTACTGATCCAGACGTTGTAAGAATTAAGGGAAGTGATGGAGTGAATATACTTAATTCTGATTCAGAACTTGCTGTTGCGAGTAGTGGAGGTTCTGGTGAGGCAGGACCTGTTGCTGCAATCCGAATGCCAATGCTACGGGTTTGTAATTTCAAAGGAGGAACGCCTGAGCTAAGGCAGACATGTTATGCAATATTGGTCTTGATTCTTCCTATTGGAGAGCCTAGATCTTGGAGTGGTCAGGAGCTGGAGATAATTAAGGTGGTTGCTGATCAGGTCGCAGTGGCTCTATCTCATGCTGCAATTCTTGAAGAGTCCCAACTTATGAGAGAGAAGTTGGAAGAGAGAAATCGAGCCTTGCAACAGGCAAAACGAAATGCTATGATGGCAAGCCAGGCAGAAACTCATTTCAGAAAGACCAGCAATGTCCTATCAAACTTGATAAATGATGCCATGGACAACTCTACAAAGGATGATGGAAGATTTCCATTGGAGATAAGGTCTTTTGGGTTACATTCCATGATAAAGGAAGCAGCTTGCCTTGCTAAGTGCATGTGTGTTTATAGGGGCTTTGGATTTTTGATTGAGGTTGATAAGTCTTTACCTGACAATGTTATGGGTGATGAGAGGAGGGTTTTTCAGGTGATTTTGCATATGGTTGGGAACCTACTGGATCGCAACCACGGGGAAGGGATCCTTGTATTTCGGGTTTTTGCCGAAACTGGAAGTCAGGGAAGGAATGACAAAGGGTGGACATCCTGGAGACCGAGCTCATCCAGTGGTGATGTAAATATTAGATTTGAGTTAGGGATCAACAGTAGTGATTCTGAAGTGGTGAGCTCAGTTTCTTCAGGGCTTGGGGGTAGAAAATATACCAGTGATAGGGTTGAGGACAGATTGAGCTTCAGTATTTGCAAGAGGATAGTCCAGTTGATGCAAGGGAACATATGGTTGGTACCATATTCTCATGGTTTTCCTCAAAGCATGACACTTCTTCTTCGGTTTCAATTACGACCCTCCATTGCTATTGCCATCTCTGAACCTGGAGAATCTTCGGAACGCAGCAATTCCAATTCAATGTTGAGAGGTCTGCAAGTTCTGTTAGTTGACAATGATGATGTAAATAGAGCAGTGACCCAAAAATTGCTTCAGAGACTAGGTTGTGTTGTAACTTCAGTCTCTTCAGGATTTGAATGCCTTACTGTCATTGGACCTGCTGGATCTTCCATTCAAGTCATTCTTTTGGCTCTTCACACGCCTGATTTAGATGGCTTTGAAGTTGCCACAAGGATTCGCAAGTTTAGAAGTGGAAATTGGCCTTTGATTGTTGCTTTGACTGCAAGTGCTGAAGAAGATTTGTGGGAAAGATGCATGCAAATAGGTATTAATGGAGTTATCAGAAAACCAGTTTTGTTGCAAGGAATTGCTAGTGAGCTCAGAAGAATCTTGATGGGAATAATGTCCTGTGAAAATGGGTGCATCTAG 2178 0.4252 MLKAVASGVLITSILICASATDNGFPRCNCDDEASLWTIESILECQRVGDFLIAVAYFSIPIELLYFISCSNVPFKWVLVQFIAFIVLCGLTHLLNGWTYGPHTFQLMVALTVFKILTALVSCATAITLITLIPLLLKVKVREFMLKKKTWDLGREVGIIMKQKEAAMHVRMLTQEIRKSLDRHTILYTTLVELSKTLGLQNCAVWMPNVEKTEVNLTHELNERNFNCSIPITDPDVVRIKGSDGVNILNSDSELAVASSGGSGEAGPVAAIRMPMLRVCNFKGGTPELRQTCYAILVLILPIGEPRSWSGQELEIIKVVADQVAVALSHAAILEESQLMREKLEERNRALQQAKRNAMMASQAETHFRKTSNVLSNLINDAMDNSTKDDGRFPLEIRSFGLHSMIKEAACLAKCMCVYRGFGFLIEVDKSLPDNVMGDERRVFQVILHMVGNLLDRNHGEGILVFRVFAETGSQGRNDKGWTSWRPSSSSGDVNIRFELGINSSDSEVVSSVSSGLGGRKYTSDRVEDRLSFSICKRIVQLMQGNIWLVPYSHGFPQSMTLLLRFQLRPSIAIAISEPGESSERSNSNSMLRGLQVLLVDNDDVNRAVTQKLLQRLGCVVTSVSSGFECLTVIGPAGSSIQVILLALHTPDLDGFEVATRIRKFRSGNWPLIVALTASAEEDLWERCMQIGINGVIRKPVLLQGIASELRRILMGIMSCENGCI 725
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi212g00045 725 Gene3D - 367 555 IPR036890 -
Sebi212g00045 725 SUPERFAMILY GAF domain-like 185 331 - -
Sebi212g00045 725 Gene3D - 169 339 IPR029016 -
Sebi212g00045 725 Coils Coil 334 364 - -
Sebi212g00045 725 PIRSF Ethylen_sen_hybr_HK 368 720 IPR014525 GO:0004672|GO:0005789|GO:0009723|GO:0038199|GO:0051740
Sebi212g00045 725 PIRSF Ethylen_sen_hybr_HK 1 371 IPR014525 GO:0004672|GO:0005789|GO:0009723|GO:0038199|GO:0051740
Sebi212g00045 725 SUPERFAMILY CheY-like 592 714 IPR011006 -
Sebi212g00045 725 SMART gaf_1 182 338 IPR003018 GO:0005515
Sebi212g00045 725 SMART REC_2 595 714 IPR001789 GO:0000160
Sebi212g00045 725 Pfam GAF domain 182 328 IPR003018 GO:0005515
Sebi212g00045 725 CDD HATPase_ETR2_ERS2-EIN4-like 432 564 - -
Sebi212g00045 725 ProSiteProfiles Response regulatory domain profile. 596 714 IPR001789 GO:0000160
Sebi212g00045 725 CDD REC_ETR-like 595 710 - -
Sebi212g00045 725 PANTHER TWO-COMPONENT SENSOR HISTIDINE KINASE 25 369 - -
Sebi212g00045 725 FunFam Ethylene receptor 593 716 - -
Sebi212g00045 725 SUPERFAMILY ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 380 552 IPR036890 -
Sebi212g00045 725 Pfam Response regulator receiver domain 597 704 IPR001789 GO:0000160
Sebi212g00045 725 Gene3D - 577 714 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi212g00045 Sebi-Chr212 935040 937958 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi212g00045 22 714 Miscellaneous Gene Families AT3G04580 55.047 0.0 762
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Sebi212g00045 GAF 1.3e-11 CL0161
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi212g00045 K14509 - gmx:100787425 1230.7