Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi212g00043 ATGGAGGTAGCTGGAGGAGCTGATATAGCTGACAGTGTAGCCCAATTTGCAAGGAGGCGTCAGCGTGGTGTTTGTGTCCTCAGTGGTAGTGGCTCTGTTGCAAACGTTACTCTAGACAACCAGCAGCACCTGGACCTTCCCCTCCAGGGTCCTACAGGACTCACAGTGTATCTTGCTGGAGGACAGGGTCAGGACTACCACTGGATGATGAGGATGAAGGGCCTAGTTCTGCTGTGCAAGGAGGCGCTGGATCGCCGCCGGCGATGGTGGCGGGGATTGGAGGAAGTGGTACTGCTCATCATCATCAGTTGCAAGCAGCAGCCTGGAGGAGGGCTTCCAGATCCATCCTCTCTGCCTTTGTATAATTTACCACCGAATTTGTTGCCTAATGGAGGAGGACAGGTGGGACATGAGGCTCTTGCTTGGGCTCATGGAAGACAACCTTACTGA 450 0.5422 MEVAGGADIADSVAQFARRRQRGVCVLSGSGSVANVTLDNQQHLDLPLQGPTGLTVYLAGGQGQDYHWMMRMKGLVLLCKEALDRRRRWWRGLEEVVLLIIISCKQQPGGGLPDPSSLPLYNLPPNLLPNGGGQVGHEALAWAHGRQPY 149
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi212g00043 149 SUPERFAMILY AF0104/ALDC/Ptd012-like 2 64 - -
Sebi212g00043 149 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 1 40 IPR014476 GO:0003680
Sebi212g00043 149 Pfam Plants and Prokaryotes Conserved (PCC) domain 2 40 IPR005175 -
Sebi212g00043 149 CDD DUF296 2 38 IPR005175 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi212g00043 Sebi-Chr212 887874 888477 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi212g00043 1 149 AT-hook Motif Nuclear Localized (AHL) Family AT4G14465 40.437 3.22e-24 93.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi212g00043 - - mus:103980122 95.1301