Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi212g00032 ATGGAGGAGCATCACAAGGGGAAGCATGGAAAGGAGGAGAAAGGAAGGGAAGAGGTCCGGTACCGAGGTGTCCGGCGGCGGCCATGGGGGAAGTATGCGGCGGAGATAAGAGATCCATCTAAACAAGGGACAAGGCTGTGGTTGGGGACATTTGATACTGCTGAAGAGGCTGCTAGAGCTTATGATAGAGCAGCTTTTAATTTGAGGGGTCATCTTGCAATTCTGAATTTTCCTAATGAGTACTATTCTCAAATAAGGGGCTCACCACCATATCCACCTCATTTGGCATCTCCTTCTTCTGCCAGTGGAAGTTCTTCTCAGAGGCATGTCTTTGAGTTTGAGTGTTTGGATGATAAGGTGTTGGAGGAACTTCTTGAGTCAGAGGAGCAGAAGAAGAAAAAGAAGGGAGATTGA 414 0.4758 MEEHHKGKHGKEEKGREEVRYRGVRRRPWGKYAAEIRDPSKQGTRLWLGTFDTAEEAARAYDRAAFNLRGHLAILNFPNEYYSQIRGSPPYPPHLASPSSASGSSSQRHVFEFECLDDKVLEELLESEEQKKKKKGD 137
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi212g00032 137 ProSiteProfiles AP2/ERF domain profile. 20 78 IPR001471 GO:0003700|GO:0006355
Sebi212g00032 137 Pfam AP2 domain 20 71 IPR001471 GO:0003700|GO:0006355
Sebi212g00032 137 SUPERFAMILY DNA-binding domain 20 79 IPR016177 GO:0003677
Sebi212g00032 137 CDD AP2 20 79 IPR001471 GO:0003700|GO:0006355
Sebi212g00032 137 Gene3D AP2/ERF domain 19 79 IPR036955 GO:0003700|GO:0006355
Sebi212g00032 137 PRINTS Ethylene responsive element binding protein signature 44 60 IPR001471 GO:0003700|GO:0006355
Sebi212g00032 137 PRINTS Ethylene responsive element binding protein signature 21 32 IPR001471 GO:0003700|GO:0006355
Sebi212g00032 137 SMART rav1_2 20 84 IPR001471 GO:0003700|GO:0006355
Sebi212g00032 137 FunFam Ethylene-responsive transcription factor 2 19 79 - -
Sebi212g00032 137 PANTHER DNA-BINDING DOMAIN 10 131 IPR044808 GO:0003700|GO:0009873
Sebi212g00032 137 MobiDBLite consensus disorder prediction 86 105 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi212g00032 Sebi-Chr212 705256 705669 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi212g00032 18 132 AP2-EREBP Transcription Factor Family AT3G23230 68.293 1.55e-52 161
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Sebi212g00032 AP2 3.4e-17 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi212g00032 - - gmx:100793703 142.51