Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi212g00029 ATGGATTCACCCTTAACCTTGAACTCTTCCAATTCAGAATTCTCCTCAGAATCCTCATCCTTCGAGTTCAATTACCTTCCTTTCAACGAGAACGATCCTGAGGAGATGCTTCTCTATGGCATGATCACCGACGCCAATAGTAACACCCTCTTCAACCAGTCCTTTGATACAAGCAACAGAGTGAAGGAAGAGGAGGTGAGTTCTGAAGAAAATGGCGCCAGGAAGGAGAAGTCGTACCGAGGTGTTAGAAGACGGCCATGGGGTAAGTTTGCAGCAGAGATAAGGGATTCAACGAGACATGGGATAAGGGTTTGGTTGGGGACTTTTGATAGTGCTGAAGCTGCGGCTTTGGCTTATGATCAAGCTGCTTTTTCTATGAGGGGTTCTGCGGCTATACTCAATTTCCCTGTTGAAATTGTGAGGGAATCGTTAAAGGAGATGAATTGTGGTGGGCATGGTGTTGGTGAAGCAGGGTGTTCCCCTGTTGTTGCTCTGAAGAGGAAGCACTCGTTGAGGAGGAAAATTGGTGTCAAGAAGAATAATAAAGAAAGAGATGTTGTTATTAGGAATAAAAGGATGGACAATGCTGTAGTGTTTGAAGATCTTGGTGCTGATTATTTAGAACAATTGTTGATGTCTTCTGATGAAATCCCTAGTGCTTGGTGA 666 0.4414 MDSPLTLNSSNSEFSSESSSFEFNYLPFNENDPEEMLLYGMITDANSNTLFNQSFDTSNRVKEEEVSSEENGARKEKSYRGVRRRPWGKFAAEIRDSTRHGIRVWLGTFDSAEAAALAYDQAAFSMRGSAAILNFPVEIVRESLKEMNCGGHGVGEAGCSPVVALKRKHSLRRKIGVKKNNKERDVVIRNKRMDNAVVFEDLGADYLEQLLMSSDEIPSAW 221
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi212g00029 221 PRINTS Ethylene responsive element binding protein signature 102 118 IPR001471 GO:0003700|GO:0006355
Sebi212g00029 221 PRINTS Ethylene responsive element binding protein signature 79 90 IPR001471 GO:0003700|GO:0006355
Sebi212g00029 221 CDD AP2 77 137 IPR001471 GO:0003700|GO:0006355
Sebi212g00029 221 MobiDBLite consensus disorder prediction 56 78 - -
Sebi212g00029 221 FunFam Ethylene-responsive transcription factor 2 77 138 - -
Sebi212g00029 221 SUPERFAMILY DNA-binding domain 78 138 IPR016177 GO:0003677
Sebi212g00029 221 Gene3D AP2/ERF domain 77 138 IPR036955 GO:0003700|GO:0006355
Sebi212g00029 221 ProSiteProfiles AP2/ERF domain profile. 78 136 IPR001471 GO:0003700|GO:0006355
Sebi212g00029 221 PANTHER DNA-BINDING DOMAIN 40 212 IPR044808 GO:0003700|GO:0009873
Sebi212g00029 221 SMART rav1_2 78 142 IPR001471 GO:0003700|GO:0006355
Sebi212g00029 221 MobiDBLite consensus disorder prediction 58 77 - -
Sebi212g00029 221 Pfam AP2 domain 78 128 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi212g00029 Sebi-Chr212 632036 632701 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi212g00029 26 215 AP2-EREBP Transcription Factor Family AT3G23240 62.105 1.54e-72 218
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Sebi212g00029 AP2 7.9e-15 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi212g00029 K14516 - gmx:100790598 268.47