LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Sebi212g00023	ATGGCTGGAGCTGGAGGACAACTAGGAGTGCTTAATGCACTCGATGTGGCCAAGACACAATGGTACCACTTCACTGCAATTGTGATTGCTGGAATGGGTTTCTTCACAGATGCCTATGATCTCTTTTGCATTTCCCTTGTAACCAAGTTGCTGGGACGGATATATTACACAGATTATAACAAACCAAAGCCTGGTGTTCTTCCTCCTAATGTGCAAGCTGCTGTGACTGGTGTTGCACTATGTGGCACTTTAGCTGGCCAGCTTTTCTTTGGTTGGCTTGGTGACAAGTTGGGAAGAAAAAAGGTTTATGGTATAACACTTATGCTTATGGTAGTGTGTTCCATTGCCTCGGGGCTATCTTTTGGGTCTAGTGCAAAGGGTGTCATGGCCACACTTTGTTTCTTCAGGTTTTGGCTTGGGTTTGGGATTGGTGGTGATTACCCTCTTTCAGCTACAATCATGTCTGAATATGCCAACAAAAAGACACGAGGGGCATTTATTGCTGCAGTGTTTGCTATGCAAGGATTTGGAATCATGGCTGGTGGAATTGTTGCCTTGATTGTCTCATCTTCATTTGACCACAAATACAAGGTTCCTACTTATCAAGAAGATGCAAAAGCATCAATGGTGTTACCTGCCTTTGATTATGTTTGGCGTATCATTTTGATGTTTGGTGCAATTCCAGCTGCTCTTACCTACTACTGGCGTATGAAAATGCCAGAGACAGCTCGTTACACAGCCCTTGTTGCAAAGAATGCAAAACAAGCTGCTTCAGACATGTCTAAGGTGTTACAAGTTGAAATTGAAGCTGAAGAGGACAAGGTGCAGCACTTGATTGAGAGTCAAAACCAAACATTTGGTTTGTTCAGCAAGGAATTTGCTAAACGCCATGGGCTGCACTTGGTAGGAACCACAACTACTTGGTTCTTATTGGACATTGCCTTCTATAGTCAGAACCTTTTCCAAAAGGACATTTTCACTGCCATTGGATGGATCCCTCCTGCAAAAGAAATGAATGCAATCCATGAGGTTTATAGGATTGCAAGAGCACAAACACTTATAGCATTGTGCAGTACTGTGCCAGGGTACTGGTTTACAGTGGCCTTCATTGATTACATGGGCCGTTTCGCTATCCAATTGATGGGTTTCTTCTTCATGACTGTCTTCATGTTTGCCCTGGCTATACCTTATCATCACTGGACCTTGAAGGAAAACAGAATTGGGTTTGTTGTGATGTACTCCCTCACCTTCTTCTTCGCCAATTTTGGTCCAAATGCCACCACATTTGTTGTGCCAGCAGAGATTTTCCCAGCAAGGCTAAGATCTACTTGTCATGGAATCTCAGCTGCTGCAGGAAAAGCAGGAGCAATTGTTGGTGCATTTGGATTCTTATATGCTGCACAAAGTACGGACCCTGCCAAGACTGATGCAGGTTACCCAACTGGTATTGGAGTTAAGAACTCTCTCATTATGCTTGGTGTGATCAACTTCTTTGGAATTATATTCACCTTGTTAGTACCAGAATCTAAGGGAAAATCACTGGAAGAGTTGAGTGGGGAGACTGAAGAAGATGGTGTTGAGGCTATAGAGGCAGCAGGGTCTTCTAGGACAGTACCAGTTTAA	1623	0.4356	MAGAGGQLGVLNALDVAKTQWYHFTAIVIAGMGFFTDAYDLFCISLVTKLLGRIYYTDYNKPKPGVLPPNVQAAVTGVALCGTLAGQLFFGWLGDKLGRKKVYGITLMLMVVCSIASGLSFGSSAKGVMATLCFFRFWLGFGIGGDYPLSATIMSEYANKKTRGAFIAAVFAMQGFGIMAGGIVALIVSSSFDHKYKVPTYQEDAKASMVLPAFDYVWRIILMFGAIPAALTYYWRMKMPETARYTALVAKNAKQAASDMSKVLQVEIEAEEDKVQHLIESQNQTFGLFSKEFAKRHGLHLVGTTTTWFLLDIAFYSQNLFQKDIFTAIGWIPPAKEMNAIHEVYRIARAQTLIALCSTVPGYWFTVAFIDYMGRFAIQLMGFFFMTVFMFALAIPYHHWTLKENRIGFVVMYSLTFFFANFGPNATTFVVPAEIFPARLRSTCHGISAAAGKAGAIVGAFGFLYAAQSTDPAKTDAGYPTGIGVKNSLIMLGVINFFGIIFTLLVPESKGKSLEELSGETEEDGVEAIEAAGSSRTVPV	540

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Annotation information

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Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Sebi212g00023	540	Gene3D	MFS general substrate transporter like domains	274	533	IPR036259	-
	Sebi212g00023	540	Gene3D	MFS general substrate transporter like domains	22	270	IPR036259	-
	Sebi212g00023	540	NCBIfam	phosphate:H+ symporter	13	520	IPR004738	GO:0005315\|GO:0006817\|GO:0016020
	Sebi212g00023	540	Pfam	Sugar (and other) transporter	27	517	IPR005828	GO:0016020\|GO:0022857\|GO:0055085
	Sebi212g00023	540	CDD	MFS_PhT	27	510	-	-
	Sebi212g00023	540	ProSiteProfiles	Major facilitator superfamily (MFS) profile.	26	511	IPR020846	GO:0022857
	Sebi212g00023	540	PANTHER	SOLUTE CARRIER FAMILY 22 MEMBER	23	514	-	-
	Sebi212g00023	540	SUPERFAMILY	MFS general substrate transporter	14	518	IPR036259	-
	Sebi212g00023	540	FunFam	Inorganic phosphate transporter 1-6	22	531	-	-
	Sebi212g00023	540	MobiDBLite	consensus disorder prediction	515	540	-	-

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Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Sebi212g00023	Sebi-Chr212	507050	508672	Dispersed/Tandem

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Sebi212g00023	4	524	Inorganic Solute Cotransporters	AT3G54700	82.150	0.0	877

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Pathway information

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Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Sebi212g00023	K08176		-	gmx:100802890	967.607

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