Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi212g00021 ATGAGTGAATACCTCAAGCGAGACTACGTCGTTTTGGGAGAGATCGGCCAGGGAAGATTCGGCACCGTTTTCCGGTGCTCTTCCGTGGACTCCGGCGACTCCTTTGCCGTTAAATCCATCGACAAATTGGCCTTAACCGCCGTAGGAGACTCCTTAGACACTCAATGCCTCTTAACAGAGCCCAAAATCCTTCAACTTCTCTCCTCTCACCCTCACATAGTTCAACTCCACAACCTCTACGAGGACGACACGCACCTCCACATGGTTCTTGACCTCTGTTACGAATCGGACTTTCACAATCGGGTCATGTCCGAATCCGAAGCCGCATCCGTCATGTTCCAGCTCATGCAAGCCGTGGCTCACTGCCACCGCCTCGGCGTGGCGCACCGTGACATAAAACCCGATAACATTCTCTTTGATGAGGAGAATCGGCTCAAGCTAGCCGATCTTGGTTCGGCTGAGGTATTCAAGGAGGGGGAACTGATGAGTGGGGTGGTGGGTACGCCGCATTATGTGGCGCCGGAGGTACTCGCTGGAAGGGAATACAACGAGAAGGTTGATGTGTGGAGTGCTGGTGTCGTTTTGTATGGAATGTTGGCTGGGTTTCTGCCGTTTCGAGGGGATTCGCCGGTGGAGATTTTTGAGGCTGTGCTTCGAGCCAATTTGAGGTTCCCGAGCAGAGCTTTTTGCTCTGTGTCACCGGCGGCCAAGGATCTGCTTCGTAGAATGCTCTGTAAGGACGTTTCTAGAAGGTTCTCTGCAGAACAACTTCTCAGGCACCCATGGTTTAGCATGGCTCAACAGAACATTCCAACAGGGTGA 822 0.528 MSEYLKRDYVVLGEIGQGRFGTVFRCSSVDSGDSFAVKSIDKLALTAVGDSLDTQCLLTEPKILQLLSSHPHIVQLHNLYEDDTHLHMVLDLCYESDFHNRVMSESEAASVMFQLMQAVAHCHRLGVAHRDIKPDNILFDEENRLKLADLGSAEVFKEGELMSGVVGTPHYVAPEVLAGREYNEKVDVWSAGVVLYGMLAGFLPFRGDSPVEIFEAVLRANLRFPSRAFCSVSPAAKDLLRRMLCKDVSRRFSAEQLLRHPWFSMAQQNIPTG 273
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi212g00021 273 Gene3D Phosphorylase Kinase; domain 1 1 92 - -
Sebi212g00021 273 PANTHER SERINE/THREONINE-PROTEIN KINASE 6 268 - -
Sebi212g00021 273 ProSitePatterns Protein kinases ATP-binding region signature. 15 38 IPR017441 GO:0005524
Sebi212g00021 273 Gene3D Transferase(Phosphotransferase) domain 1 93 272 - -
Sebi212g00021 273 Pfam Protein kinase domain 9 263 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi212g00021 273 SUPERFAMILY Protein kinase-like (PK-like) 4 265 IPR011009 -
Sebi212g00021 273 PIRSF ILK 4 260 - -
Sebi212g00021 273 ProSitePatterns Serine/Threonine protein kinases active-site signature. 127 139 IPR008271 GO:0004672|GO:0006468
Sebi212g00021 273 FunFam Maternal embryonic leucine zipper kinase 1 273 - -
Sebi212g00021 273 ProSiteProfiles Protein kinase domain profile. 9 263 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi212g00021 273 SMART serkin_6 9 263 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi212g00021 273 CDD STKc_CAMK 8 262 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi212g00021 Sebi-Chr212 471542 472594 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi212g00021 3 263 EF-hand Containing Proteins AT1G50700 40.149 4.32e-66 211
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Sebi212g00021 Pkinase 1.5e-68 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi212g00021 K08794 - gmx:547731 478.018