Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi211g00105 ATGGGTGCGTGCTGGAGCAGCAGGGTTAAGGCCGTGAGTCCTTCCAGTACAAGGTTCCCTTCTAGAAGCGAGAGCAGAGATGGCTATGACATCAGTTCAAATAGCAAGAGCTCATCAGCCTCCATATCCATGATTCATCGGAGTGAGGGGGAGATCTTACAATCTTCCAATTTGAAAAGCTTTAGCTACAATGAGCTAAGAACAGCCACGAGAAATTTCGCACCAGACAGTGTCTTAGGAGAGGGTGGATTTGGTTCAGTTTATAAGGGATGGATTGCTGAGTATTCACTTGCTGCTACCAAGCCAGGGATGGGCATGATTGTTGCTGTGAAGAGACTTAACCAAGATGGATCCCAGGGTCACAAGGAATGGTTGGCTGAAATACACTATCTTGGGCAACTGCAGCATCCTAATCTTGTCAAGTTGATAGGCTACTGCTTAGAGAATGAGAACCGGCTTCTAGTTTATGAATTTATGCCTAAGGGCAGTGTGGAGAATCATCTGTTCAGGATCATGTAA 519 0.4586 MGACWSSRVKAVSPSSTRFPSRSESRDGYDISSNSKSSSASISMIHRSEGEILQSSNLKSFSYNELRTATRNFAPDSVLGEGGFGSVYKGWIAEYSLAATKPGMGMIVAVKRLNQDGSQGHKEWLAEIHYLGQLQHPNLVKLIGYCLENENRLLVYEFMPKGSVENHLFRIM 172
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi211g00105 172 ProSiteProfiles Protein kinase domain profile. 73 172 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi211g00105 172 MobiDBLite consensus disorder prediction 9 37 - -
Sebi211g00105 172 ProSitePatterns Protein kinases ATP-binding region signature. 79 111 IPR017441 GO:0005524
Sebi211g00105 172 Gene3D Phosphorylase Kinase; domain 1 47 158 - -
Sebi211g00105 172 Pfam Protein tyrosine and serine/threonine kinase 77 168 IPR001245 GO:0004672|GO:0006468
Sebi211g00105 172 MobiDBLite consensus disorder prediction 1 37 - -
Sebi211g00105 172 FunFam Serine/threonine-protein kinase BIK1 38 158 - -
Sebi211g00105 172 SUPERFAMILY Protein kinase-like (PK-like) 51 170 IPR011009 -
Sebi211g00105 172 PANTHER OS01G0588500 PROTEIN-RELATED 36 170 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi211g00105 Sebi-Chr211 1397162 1398638 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi211g00105 49 171 Glycoside Hydrolase AT3G07070 45.528 3.07e-32 117
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Sebi211g00105 PK_Tyr_Ser-Thr 3.5e-17 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi211g00105 - - gmx:100793817 279.256