Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi211g00099 ATGAAGGAGAGGCAACGTTGGAAAGCTGAAGAGGACGCTTTATTATGTGCTTATGTCAAACAATATGGTCCTAGAGAATGGAATCTTGTGTCCCAGCGCATGAACACACCTCTTAACAGGGATGCAAAGTCATGCTTAGAAAGCAAACACGGCAACAAGTGGAAGAAAATCGCTGCTGAAGTCCCAGGCCGCACTGCTAAGAGGCTAGGCAAGTGGTGGGAAGTGTTCAAAGAGAAGCAATTGAGAGAAAAACAAGAGATTAACAAAACAATTGGTCCTGTTGATGACAGCAAATACGATCACATACTAGAGACTTTTGCAGAGAAACTAGTGAAAGAGCACCCTTCACCATCATATCTAATGGCTGCTTCTAATGGACCCTTTCTTCACACTGATGCACCAGCCACTGCATCAACTTTGCTTCCTCCTTGGCTTTCAAATTCTAATAACAATCCAGCTGCAGTCGCGCCGCCTTCCCTTTCAGTGACACTAAGCCTCTCTCCCTCAACAGTGACAGCACCTTCTCCATGGAGAGGACAAGAGAATGCAGCTCCTCTTGTTTTGGGGAATGTAATGCCTCATGGATCTGTTCAAGCTTTCGGCGACAATGTGCTCATGTCTGAGTTAGTGGAGTCCTGTAAAGAGTTGGAAGAAGTGCATCGCGCTTGGACTGCACATAAGAAAGAGGCAGCTTGGAGGCTAAGGAGGGTGGAGTTGCAGTTGGAGTCAGAGAAGGCCAATCGAAGGAGGGAGAAGATAGAAGAAATTGAAGCAAAGATTAAAGCTCTAAGGGAAGAACAGAATGTTGCTTTGGATAGAATTGAAGCAGACTATAGGGAACAGTTAGGTGGATTGAGGAGAGATGCAGAAACCAAAGAACAGAAGTTAACTGAGCAATGGACTGCAAACATTTGCGCCTTGTGA 924 0.4545 MKERQRWKAEEDALLCAYVKQYGPREWNLVSQRMNTPLNRDAKSCLESKHGNKWKKIAAEVPGRTAKRLGKWWEVFKEKQLREKQEINKTIGPVDDSKYDHILETFAEKLVKEHPSPSYLMAASNGPFLHTDAPATASTLLPPWLSNSNNNPAAVAPPSLSVTLSLSPSTVTAPSPWRGQENAAPLVLGNVMPHGSVQAFGDNVLMSELVESCKELEEVHRAWTAHKKEAAWRLRRVELQLESEKANRRREKIEEIEAKIKALREEQNVALDRIEADYREQLGGLRRDAETKEQKLTEQWTANICAL 307
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi211g00099 307 Gene3D - 4 47 - -
Sebi211g00099 307 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 48 81 IPR017930 -
Sebi211g00099 307 CDD SANT 6 57 IPR001005 -
Sebi211g00099 307 SMART sant 3 79 IPR001005 -
Sebi211g00099 307 PANTHER PROTEIN ROUGH SHEATH 2 HOMOLOG 1 47 - -
Sebi211g00099 307 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 1 47 IPR017930 -
Sebi211g00099 307 Coils Coil 227 273 - -
Sebi211g00099 307 ProSiteProfiles Myb-like domain profile. 1 45 IPR001005 -
Sebi211g00099 307 SUPERFAMILY Homeodomain-like 4 71 IPR009057 -
Sebi211g00099 307 Gene3D - 48 92 - -
Sebi211g00099 307 FunFam MYB-related transcription factor 4 57 - -
Sebi211g00099 307 Pfam Myb-like DNA-binding domain 4 45 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi211g00099 Sebi-Chr211 1361385 1362388 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi211g00099 1 302 MYB Transcription Factor Family AT2G37630 58.286 4.01e-126 363
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Sebi211g00099 Myb_DNA-binding 3.6e-08 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi211g00099 K09422 - gmx:100819082 411.764