Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi211g00092 ATGCCATCAGTAGCAAAATGGAGAGAAAATGGAAATTTCAATATAAATGAAGCAATAGTAAGAGATGTCAATCCTTCTTCAGGATCTGCTCAAGGTCAGAACCAGAAAGAAAGCAAACATGCTAAGAATCTCAAACAGAAAATAGATCATGTAACTGGAGAGAGCAGAAAAGAAAAGCTTCGTGTTACAATGGATGCTGTCATTCATAAACTCCCCCAAGGCCATGGGATATCATATGACTTGAAGAAGGAAATTTTTAAGAAAATGACTGAACCTAATGTTACTAGAGAAGGTGAATACTGTTCTCCCAGTTGTAATGATAGTGATCTCTCTACTTATTCCTTTCCCAAGGATCACAAGCACAGCATAAGAAGAAACTGGTCCCTTCAAGATTCACTAGAAAGTTATTGTCAACTCCATGAGAATAGCTTTAACACAGAAGCTAGTAACCCTCAATCTGAGCAACTAAAACTAAGAACAGAAAAAGCATGTTCACCATTGAGGAAGCAGATACCCTTTCAAAGGATTCTTTCATTACCTGATCTCCAATCTTTTACCTATGCTTATCAGATTGGGGAGATTTCTGATATTTTATCTCTCACTGAGCCAATCAAGGCTTCTAAGGATGGAACTATGAGTTCTGAGAGTATTGGTTATCAGAAAAAGAAGCTTGGCCTTAATGTGCAATCAAAAAGTCCATTGCAGTTAGATACAATTCTGGAAAATTTGAATCAAGAGAACCATGTTAGTGTAGGTGAAAATGATTTAGTGACTGGTGCTAATATTGTGGGATCAGGATCAGATTGTAGCAGTGAAATTAATGACAAGGTGAGCATGGTAATTGATGATTTTGGACACAGTAGTTTAAAAAACGATGGCACTTCCAATGACCAAGATATTGGGATTGGACCAATAAAAGAATACAAGGCTGCAATAGCTGCATCAGATTCAAAATCTAAGCCAGAATCTATTGATAGAGTGGATAATGTGGCTGAGCAACAAGAGGCTAATATGGATTCCCTAGTGGCTGAGACCACAGAGAGTGCTCAAAAAGTGGAGATTCTAACCAAGCAATTGAATTATGAGATTCCTCATTTTCATGTGGACACCAGAGACAAAGCTGATTTCAATTATGTGAAATATGTACTTGAAATATCTGGACTGACTGGTAATGATTGCCTTTCAGCATGGCATTCTAGTGACCAACCAATTGATCCATTACTTTATGAAGAAATGGAAGGTGATCCTGATTTCTGTACTTATGAAGCTGGTCAGTGTAATCACCATGTATTGTTTGATTTAATTAATGAGACATTGTTGGAAATTTATGGGAAGTCTTACTGCTACCTTCCCATACAATTGTCATATCTTCCCCACATTCATCCAATGTCAGTAGGGTGTCACATTCTCCATCAAGTGTGGACTCATATGAGCAAGTGCATGAGATCCAAACCTGGCCAAACAATAGATGATCATGTAAATAGAGATCTAACAAAGCATGGTGAGTGGGTGAACCTTCAATTATGTGCTGAGTGTGTAGGTTTGGAGCTGGAAGACTTGATTTTCCATGATCTCCTAGAGGAAATAATGTGGGACTTAGCTAGCTTGTGA 1611 0.3799 MPSVAKWRENGNFNINEAIVRDVNPSSGSAQGQNQKESKHAKNLKQKIDHVTGESRKEKLRVTMDAVIHKLPQGHGISYDLKKEIFKKMTEPNVTREGEYCSPSCNDSDLSTYSFPKDHKHSIRRNWSLQDSLESYCQLHENSFNTEASNPQSEQLKLRTEKACSPLRKQIPFQRILSLPDLQSFTYAYQIGEISDILSLTEPIKASKDGTMSSESIGYQKKKLGLNVQSKSPLQLDTILENLNQENHVSVGENDLVTGANIVGSGSDCSSEINDKVSMVIDDFGHSSLKNDGTSNDQDIGIGPIKEYKAAIAASDSKSKPESIDRVDNVAEQQEANMDSLVAETTESAQKVEILTKQLNYEIPHFHVDTRDKADFNYVKYVLEISGLTGNDCLSAWHSSDQPIDPLLYEEMEGDPDFCTYEAGQCNHHVLFDLINETLLEIYGKSYCYLPIQLSYLPHIHPMSVGCHILHQVWTHMSKCMRSKPGQTIDDHVNRDLTKHGEWVNLQLCAECVGLELEDLIFHDLLEEIMWDLASL 536
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi211g00092 536 Coils Coil 324 344 - -
Sebi211g00092 536 PANTHER PROTEIN TRM32 23 533 IPR044257 -
Sebi211g00092 536 MobiDBLite consensus disorder prediction 23 37 - -
Sebi211g00092 536 MobiDBLite consensus disorder prediction 23 45 - -
Sebi211g00092 536 Pfam Domain of unknown function (DUF4378) 375 528 IPR025486 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi211g00092 Sebi-Chr211 1185438 1187675 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi211g00092 356 522 TRM (TON1 Recruiting Motif) Superfamily AT5G02390 45.556 1.65e-43 163
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi211g00092 - - gmx:121174644 646.351