Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi211g00082 ATGTCTTCCACTGCTGGCAAGGCAATTCCCTGCAAAGCTGCAGTTGCATGGGAAGCAGGGAAGCCATTGGTGATTGAGAATGTGGAGGTTGCTCCTCCACAGGAGAATGAAGTTAGGATCAAAGTCAAATATTCCTCACTCTGCCATACTGATCTCCATTTCTGGGAATCCAAGGGTTTACCACCAATGTTTCCACGCATATTTGGCCATGAAGCATCTGGTATTGTGGAGAGTGTAGGTGATGGGGTATTAGACCTCAAGGCAGGGGATCATGTGCTTCCAGTATTCACAGGGGAGTGTGGGGAATGCCCACATTGCAAATCTGAGGAGAGCAATATGTGTGATTTGTTGAGAATAAATCCAGTAAGAGAAGTGATGATCAGTGATGGAAAGTCTAGGTTCACTATTAATGGCAAACCCATAAGCCACTTTCTTGGCACATCTACTTTTAGCCAATACACTGTTGTTCATTCAGGTTGTGTTGTAAAGATCAATCCAAAAGCTCCTCTTGACAAAGTTTGCATCCTAAGTTGTGGCATCACAACAGGATTAGGAGCAGTTCTGAATGTTGCAAAGCCAAAGAAAGGTGCTTCCATAGCAGTATTTGGGCTTGGAACTGTTGGGGCTAGCTGTAATGTCATTTATAAAAATTCCCTTTGGTTATATGATCAGGCTGTAGAAGGTGCAAGAATTGCTGGGGCATCCAAGATTATTGGGGTTGACTTGAATCCTAATAGATTTAAGGAAGCCAAGAAATTTGGACTAACTGATTTTATAAATCCGAAAGAACATGAAAAGCCAGTTCATGAGGTCCTGAAGGAGATGACAAATGGAGGAGTAGATAGGAGTATAGAGTGCACTGGAAACATCAATGCCTTGATGTCTGCTTTAGATGCTGCACATGATGGATGGGGTCGTGCTGTCCTTGTTGGAGTACCTAGTATGGATGCAGTTTTCAAGACAAATCCCTACAATTTCCTTGATGGAAAGACAATTACAGGTACTACCTTTGGGAACTACAAGCCTAAAACAGGCCTTCCATCAATGGTTGATTTGTTCATGAACAATACATTGGAGTTGGAAAAGTTTATAACTCATAGAGTTCCTCTCTCAGAAATCAATAATGCCTTTGATTACATGATTAAGGGGCAGAGTTTAAGGACAATCATAGATATGGAAAACTAG 1185 0.4186 MSSTAGKAIPCKAAVAWEAGKPLVIENVEVAPPQENEVRIKVKYSSLCHTDLHFWESKGLPPMFPRIFGHEASGIVESVGDGVLDLKAGDHVLPVFTGECGECPHCKSEESNMCDLLRINPVREVMISDGKSRFTINGKPISHFLGTSTFSQYTVVHSGCVVKINPKAPLDKVCILSCGITTGLGAVLNVAKPKKGASIAVFGLGTVGASCNVIYKNSLWLYDQAVEGARIAGASKIIGVDLNPNRFKEAKKFGLTDFINPKEHEKPVHEVLKEMTNGGVDRSIECTGNINALMSALDAAHDGWGRAVLVGVPSMDAVFKTNPYNFLDGKTITGTTFGNYKPKTGLPSMVDLFMNNTLELEKFITHRVPLSEINNAFDYMIKGQSLRTIIDMEN 394
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi211g00082 394 FunFam Alcohol dehydrogenase 6 14 198 - -
Sebi211g00082 394 Pfam Alcohol dehydrogenase GroES-like domain 36 163 IPR013154 -
Sebi211g00082 394 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 69 83 IPR002328 GO:0008270|GO:0016491
Sebi211g00082 394 SUPERFAMILY GroES-like 343 390 IPR011032 -
Sebi211g00082 394 Pfam Zinc-binding dehydrogenase 225 340 IPR013149 -
Sebi211g00082 394 SUPERFAMILY GroES-like 4 187 IPR011032 -
Sebi211g00082 394 CDD alcohol_DH_plants 9 391 - -
Sebi211g00082 394 Gene3D - 183 335 - -
Sebi211g00082 394 Gene3D - 19 384 - -
Sebi211g00082 394 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 169 355 IPR036291 -
Sebi211g00082 394 FunFam S-(hydroxymethyl)glutathione dehydrogenase 183 335 - -
Sebi211g00082 394 PANTHER ALCOHOL DEHYDROGENASE 6 390 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi211g00082 Sebi-Chr211 994458 996836 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi211g00082 35 181 Monolignol Biosynthesis Gene Families AT4G37990 29.530 6.97e-11 61.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi211g00082 K18857 - nnu:104602143 609.372