Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi211g00077 ATGGCTTCAAACTCCATGGATGGAGGACCAACACAGCTCACAGATGATTATGATGCCTTGATTTCAACCACTGACGTTGAGCTTCTCAAGCGAGCTTGGCGTAACGAGAAGGCAGCCCCTGAGATTCTTCGCTTTGAAACTGATTTGATCACCCGCGTCAGAGAACAGATTCAATTGATGGAAGAAACTGTGGAGGAGAAATCTGCTGGTGGTACTAACCCTCTTTCAGTATCCCTGTATCAGATGGACTTGGATAGAACCCTGTTTCTATTAAGATCATATCTTCGCATCCGCATTCAGAAGTTTTCTGGTTGCAGGTGTACAGATGACCTAAAACAATATCTGGACGATAGTGTTCTATCAAAATTGCCTGAAAATTATCAATCTGTTCAGAGACAATCTGTAATTAGTGAAGAGGATGACATGGTCCCAGAACCACAATTAGACACATTTGTTTTATGTAGAAGTAAAGAATATCTCACAGGCATTCAACTTGAAGATGGACCTGTTGATGACAGGTCGAAGCTCTTTGAGATGGAGCCCGGTGTCCTCTACTTCATATGTTACAAATCAATAAAGGCACTTGTAGAGAGTGGCAAAATTGATCTACTCTGA 615 0.4195 MASNSMDGGPTQLTDDYDALISTTDVELLKRAWRNEKAAPEILRFETDLITRVREQIQLMEETVEEKSAGGTNPLSVSLYQMDLDRTLFLLRSYLRIRIQKFSGCRCTDDLKQYLDDSVLSKLPENYQSVQRQSVISEEDDMVPEPQLDTFVLCRSKEYLTGIQLEDGPVDDRSKLFEMEPGVLYFICYKSIKALVESGKIDLL 204
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi211g00077 204 CDD GINS_A_Sld5 25 101 IPR038749 -
Sebi211g00077 204 PANTHER SLD5 PROTEIN 106 204 IPR008591 GO:0006261
Sebi211g00077 204 Gene3D - 105 194 - -
Sebi211g00077 204 Gene3D - 12 103 - -
Sebi211g00077 204 SUPERFAMILY GINS helical bundle-like 22 134 IPR036224 -
Sebi211g00077 204 CDD GINS_B_Sld5 146 204 IPR031633 -
Sebi211g00077 204 Pfam DNA replication complex GINS protein SLD5 C-terminus 146 204 IPR031633 -
Sebi211g00077 204 PIRSF GINS_Sld5 1 105 IPR008591 GO:0006261
Sebi211g00077 204 PIRSF GINS_Sld5 104 204 IPR008591 GO:0006261
Sebi211g00077 204 SUPERFAMILY PriA/YqbF domain 148 204 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi211g00077 Sebi-Chr211 938533 941226 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi211g00077 1 142 Core DNA Replication Machinery Family AT5G49010 55.152 2.05e-54 170
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi211g00077 K10735 - qsa:O6P43_008399 319.701