LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Sebi211g00061	ATGGAAAACATTAATGAAAACGTTGGTGAGAATGTTGTTGGGTTGGAAGAAATTGAAAGTGAAGATGATGGTGGCAATGCATTTCATTACGACTCTCGTGAATTTGTAATTGGTGTGGATTCTGAGGCTAATTTTGTTGACATTAATCTTGACATGTTAACTGAGGAAAACTTGAGGAAATTAAATTTTGCTAATTTGGATGTTGCGTATAATTTTTATAATAATTGGTATGGAAAAATGAAGGGATTTTCAGCACGAAAGGGCAAAGAACGTAAAAATGCAATGGAAGAAATTATTGAGAAGACGTATCTATGCCATAGGGAAGGAAAGAGACCAATTAATACGAATGAAAAGATGGGGAAGAAAAAACGTGAAGCAAAGCCTGAGACAAGGTGTTTATGTCCTGCAAAAATGAAGGTTCGGAAATTGAGTGAAGCTGATATCATGGAGATGAATAACATGCGAAATGCAGGTATTACTACACCTCAAATTTATGGGTCATTTGTCAGCCAATCCGGTGGGTACAACAATATTGGTTTTCAGAAAAGAGATCTTTACAATGAGATTGGTAGGCAAAGAATGTTGCAGCTAAGTGATGCTAAGGGTGCAATTAAGTACCTACGTGAAAGGGAGCTGAATGAAGGGTCAATGTTTTGGAGGCACACGACTGATTATGAAGGCCGACTCCAACGATTATTTTGGTGTGACAATGGCGATCTTGCTATGCGGAATGCTACCAAAAGAGTGCTACCTAATGCACACCATAGGCTTTGTGCATGGCACCTGTGTCGTAATGCTGCCAGTAATGTTAAAAATCCTAAGATGGTTTCGATGTTTAGAAAATGTATGTTGGGTGACTATGAGGTGTCTGAGTTTAAACATAGGTGGGAGGTAATGGTGAAGGAATTTCGACTTGAGGAAAACAATTGGGTGAAGGAAATGTATGAGAAAAAGAGGATGTGGGCCACAACATACATAAGGGGAAATTTCTTTGCAGGGTTTAGGACAACCTCTCGATGCGAGGGGTTGCATGGGCAACTTGGCAAGTTTGTACACTCCCGGCATGATTTGGTTGGTTTTATGAAAAATTATGGTCGTTTCCTTGAAGTACTAAGGTATAATGAGTTAGAAGCTGATTTTGAGTCAGTACGTGGTGATATGGTCCTGGAGACTAACTTGCATGCACTAGAGAGATCAGCGTCTAAGATTTTCACAAAGGAGGTTTTCACATTGGTACGTCCCGCCCTTGCTAGGGGAAGCACTATGAGGGTCATGGGTTGTACACAGCTGATGTCACAAACCATTTTTACAGTCTCCAAGTATGGTAGATCACACAAGGAGTGA	1344	0.4018	MENINENVGENVVGLEEIESEDDGGNAFHYDSREFVIGVDSEANFVDINLDMLTEENLRKLNFANLDVAYNFYNNWYGKMKGFSARKGKERKNAMEEIIEKTYLCHREGKRPINTNEKMGKKKREAKPETRCLCPAKMKVRKLSEADIMEMNNMRNAGITTPQIYGSFVSQSGGYNNIGFQKRDLYNEIGRQRMLQLSDAKGAIKYLRERELNEGSMFWRHTTDYEGRLQRLFWCDNGDLAMRNATKRVLPNAHHRLCAWHLCRNAASNVKNPKMVSMFRKCMLGDYEVSEFKHRWEVMVKEFRLEENNWVKEMYEKKRMWATTYIRGNFFAGFRTTSRCEGLHGQLGKFVHSRHDLVGFMKNYGRFLEVLRYNELEADFESVRGDMVLETNLHALERSASKIFTKEVFTLVRPALARGSTMRVMGCTQLMSQTIFTVSKYGRSHKE	447

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Sebi211g00061	447	PANTHER	PROTEIN FAR1-RELATED SEQUENCE 10-RELATED	57	416	IPR031052	GO:0006355
	Sebi211g00061	447	Pfam	FAR1 DNA-binding domain	71	145	IPR004330	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Sebi211g00061	Sebi-Chr211	770637	772316	Transposed

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	TF	FAR1	Sebi211g00061		FAR1	3.1e-10	CL0274

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Sebi211g00061	-		-	tpra:123896136	327.405