Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi211g00056 ATGTCCCTTCCAAAACCCTCTGATGGTAATTCCCCTCAGCAGGTGAAAGAAGGAGCACCAGCAACAGCTTCATCCTCTTCTTCATGGAATATGCAAAACAGCCACAGAAATACTTTCCCCCCTTTAACTCTACAGATCAAAAGAAGCAAACTTGAAGATAGCGATGAAGATATGTTCACAGTTCCAGACGTGGAAGGCACGCCAATTAGTGTTCATTCTGCAGTGACTCTTCCAAATAGTAACCTCAATCAAAGTAACGTCACAGATCCTCAATCTCAAACTGGCTTTCCTGGAAAGCGCCGCAGGGGAAGAAACCCTGCAGATAAGGAACATAGACGCCTCAAGAGGTTGTTGAGGAACAGGGTATCTGCTCAACAAGCCCGCGAAAGAAAGAAGGTTTATGTGAATGACTTGGAATCAAGGGCTACAGAGTTGCAAGACAAGAATGCTATCTTAGAAGAGCGCATCTCAACTTTGATCAATGAGAACACCATGCTGCGGAAGGTTCTTATGAACGCAAGGCCAAAAGTTGATGATAGCATTGAACAGAAGCAGGATAAGTTGAGTAAAAGCTAA 576 0.441 MSLPKPSDGNSPQQVKEGAPATASSSSSWNMQNSHRNTFPPLTLQIKRSKLEDSDEDMFTVPDVEGTPISVHSAVTLPNSNLNQSNVTDPQSQTGFPGKRRRGRNPADKEHRRLKRLLRNRVSAQQARERKKVYVNDLESRATELQDKNAILEERISTLINENTMLRKVLMNARPKVDDSIEQKQDKLSKS 191
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi211g00056 191 FunFam Transcription factor HY5 131 172 - -
Sebi211g00056 191 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 110 173 IPR004827 GO:0003700|GO:0006355
Sebi211g00056 191 MobiDBLite consensus disorder prediction 78 95 - -
Sebi211g00056 191 SUPERFAMILY Leucine zipper domain 112 171 IPR046347 GO:0003700|GO:0006355
Sebi211g00056 191 CDD bZIP_HY5-like 122 163 - -
Sebi211g00056 191 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 115 130 IPR004827 GO:0003700|GO:0006355
Sebi211g00056 191 Pfam bZIP transcription factor 109 168 IPR004827 GO:0003700|GO:0006355
Sebi211g00056 191 Gene3D Single helix bin 131 172 - -
Sebi211g00056 191 MobiDBLite consensus disorder prediction 78 109 - -
Sebi211g00056 191 Coils Coil 135 162 - -
Sebi211g00056 191 PANTHER TRANSCRIPTIONAL ACTIVATOR HAC1 8 185 IPR044280 GO:0000981|GO:0045944
Sebi211g00056 191 SMART brlzneu 108 172 IPR004827 GO:0003700|GO:0006355
Sebi211g00056 191 MobiDBLite consensus disorder prediction 1 43 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi211g00056 Sebi-Chr211 726557 728475 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi211g00056 91 180 Basic region leucine zipper (bZIP) Transcription Factor Gene Family AT3G17609 75.824 1.06e-41 135
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Sebi211g00056 bZIP_1 5.3e-12 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi211g00056 K16241 - gmx:100783826 304.679