Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi211g00034 ATGGAAATGAACAACCAGAGAATTGAGGAAGAAAAAAAACTAGATGAGGCACGATTGTCCCAGGAAGCAGCATTGGCAATTGCAGAGAAAGAGAAAGCAAAAAGTAAAGCAGCGATGGAAACAACTAAAGCGGCTAAGAAAATTGCAAGGTTTCGAATAGCTACAGAGATAGCCACTGGCTTACTATTCCTCCATCGGACAAAGCCAGAACCGTTGGTGCACCGTGATCTGAAACCAGGAAACATTTTACTAGACCACAATTATGTAAGTAAGATTAGCGATGTTGGATTGGACAAACTTCTCCCTGCTGTAGCTTAA 318 0.4182 MEMNNQRIEEEKKLDEARLSQEAALAIAEKEKAKSKAAMETTKAAKKIARFRIATEIATGLLFLHRTKPEPLVHRDLKPGNILLDHNYVSKISDVGLDKLLPAVA 105
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi211g00034 105 ProSitePatterns Serine/Threonine protein kinases active-site signature. 72 84 IPR008271 GO:0004672|GO:0006468
Sebi211g00034 105 SUPERFAMILY Protein kinase-like (PK-like) 49 102 IPR011009 -
Sebi211g00034 105 PANTHER OS02G0152300 PROTEIN 49 103 - -
Sebi211g00034 105 Gene3D Transferase(Phosphotransferase) domain 1 21 104 - -
Sebi211g00034 105 ProSiteProfiles Protein kinase domain profile. 1 105 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi211g00034 105 Pfam Protein kinase domain 39 100 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi211g00034 Sebi-Chr211 425460 426514 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi211g00034 50 105 Receptor kinase-like Gene Family AT1G78940 85.714 1.64e-26 100
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-IXb Sebi211g00034 Pkinase 6.4e-11 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi211g00034 - - cit:102610647 105.916