Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi211g00027 ATGCTAGGAATGTCAATGGTTCCATTATTTGATGAATTGGATGAGAGGATACTAGATGCAATATGTGAAAGGCTAAAGCCTGCATTATGCACTGAAGGGACCTATCTTGTTCATGAGGGTGATCCTGTGAATGAGATGCTCTTCATAATTAGAGGCCATCTTGATTCTTACACCACAGATGGAGGCCGTGTTGGATTCTTCAACTCATACTTTATTGGGCCAGGAGATTTCTGTGGTGAAGAGCTATTAACATGGGCCATGGACCCAAGACCAAGTCTGATACTCCCATCTTCCACTAGAACAGTTAAAGCCAAATCAGAAGTAGAGGCCTTTGCACTCATAGCTGAAGACTTAAAATTTGTTGCATCTCAATTTAGAATACTACTACACAGTAAACAAGTGATGCATAAGTTCAGGTTTTGCTCACAACAATGGAGAACATGGGCTGCTTGTTTCATTCAAGCTGCATGGAGACAGCACAAGAAAAGGAAAGTAGCTGCTGAATTAATTAAGGGCCAGGGAGAATCTAGCAGCTTCTGA 540 0.4167 MLGMSMVPLFDELDERILDAICERLKPALCTEGTYLVHEGDPVNEMLFIIRGHLDSYTTDGGRVGFFNSYFIGPGDFCGEELLTWAMDPRPSLILPSSTRTVKAKSEVEAFALIAEDLKFVASQFRILLHSKQVMHKFRFCSQQWRTWAACFIQAAWRQHKKRKVAAELIKGQGESSSF 179
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi211g00027 179 ProSiteProfiles cAMP/cGMP binding motif profile. 9 94 IPR000595 -
Sebi211g00027 179 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 5 167 - -
Sebi211g00027 179 Gene3D Jelly Rolls 7 127 IPR014710 -
Sebi211g00027 179 CDD CAP_ED 9 138 IPR000595 -
Sebi211g00027 179 FunFam Cyclic nucleotide-gated ion channel 1 7 125 - -
Sebi211g00027 179 Pfam Cyclic nucleotide-binding domain 32 119 IPR000595 -
Sebi211g00027 179 SMART cnmp_10 9 140 IPR000595 -
Sebi211g00027 179 SUPERFAMILY cAMP-binding domain-like 7 127 IPR018490 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi211g00027 Sebi-Chr211 311337 312614 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi211g00027 7 169 Ion Channels AT2G28260 82.822 6.35e-95 286
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi211g00027 K05391 - gmx:100786868 292.737