Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Sebi211g00016 | ATGTTTTTCTCTGCTCCTAAATTCTACACCATGTTTATGCTCCTCTGCTTTGCCTTCCTCCTTTTCTCCACATGGGAGGTGCAAGCAAATCTTTGTCAGAGGAAAAGCACAACATGGTCAGGGCCTTGTTTTAACACAGGGGGCTGTAAAAATCAGTGCATCAACGTGGAACATGCAGCTTTCGGAGCTTGTCATGATCTTACTTACTTCTGCTACTTCAATTGCTGA | 228 | 0.4386 | MFFSAPKFYTMFMLLCFAFLLFSTWEVQANLCQRKSTTWSGPCFNTGGCKNQCINVEHAAFGACHDLTYFCYFNC | 75 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Sebi211g00016 | 75 | Gene3D | - | 31 | 75 | IPR036574 | - | |
| Sebi211g00016 | 75 | Pfam | Gamma-thionin family | 31 | 75 | - | - | |
| Sebi211g00016 | 75 | PANTHER | DEFENSIN-LIKE PROTEIN 1 | 4 | 72 | - | - | |
| Sebi211g00016 | 75 | SMART | gth_4 | 31 | 75 | IPR003614 | GO:0006952 | |
| Sebi211g00016 | 75 | SUPERFAMILY | Scorpion toxin-like | 31 | 75 | IPR036574 | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Sebi211g00016 | Sebi-Chr211 | 187474 | 187804 | Proximal |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Sebi211g00016 | 9 | 75 | Plant Defensins Gene Families | AT1G19610 | 43.243 | 9.43e-16 | 63.5 |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Sebi211g00016 | - | - | lja:Lj3g3v0720000.1 | 107.457 |