Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi210g00089 ATGGCTCACGAGATTAAAAAAGAAGAAACCGAATTCAAGGTTCCCGAAACCATCAACCCATGCAGCAACCCCACTGCCACCACCACCACCCCCACAACCTCCACAATTACAGAACCTTCCAGATTTTTTGACGATAAGGCCACCGCCAGATCCGCCACGTCATCACGCTCCCCCAAGAGATCTCACCCTCCAGACGACGAACAAGAAGGCCTTGCTCAAACGACGCCGTTCGAGGCCAAACGCGCCGTCAACCGCTGCTCCGGCTGTCGGAAGAGGGTTGGTCTCACCGGATTTCGGTGCCGCTGCGGCGACCTATTCTGCGCCGAGCACCGCTACTCCGACCGCCACGACTGCACCTACGATTACAAATCCGCCGGACGAGAGGCCATCGCCAGGGAAAATCCGGTCGTCAAAGCCGCGAAGATCGTCAAATTCTAA 438 0.5685 MAHEIKKEETEFKVPETINPCSNPTATTTTPTTSTITEPSRFFDDKATARSATSSRSPKRSHPPDDEQEGLAQTTPFEAKRAVNRCSGCRKRVGLTGFRCRCGDLFCAEHRYSDRHDCTYDYKSAGREAIARENPVVKAAKIVKF 145
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi210g00089 145 FunFam Zinc finger AN1-type containing 6 60 141 - -
Sebi210g00089 145 Pfam AN1-like Zinc finger 86 123 IPR000058 GO:0008270
Sebi210g00089 145 SMART AN1_Zf_4 86 123 IPR000058 GO:0008270
Sebi210g00089 145 SUPERFAMILY AN1-like Zinc finger 73 139 IPR035896 -
Sebi210g00089 145 ProSiteProfiles Zinc finger AN1-type profile. 80 126 IPR000058 GO:0008270
Sebi210g00089 145 MobiDBLite consensus disorder prediction 1 77 - -
Sebi210g00089 145 Gene3D - 51 141 IPR035896 -
Sebi210g00089 145 PANTHER AN1-TYPE ZINC FINGER PROTEIN 15 144 - -
Sebi210g00089 145 MobiDBLite consensus disorder prediction 16 58 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi210g00089 Sebi-Chr210 1373925 1374362 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi210g00089 84 145 C2H2 Transcription Factor Family AT3G52800 67.742 7.26e-28 99.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi210g00089 - - lja:Lj3g3v0478150.1 211.846