Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi210g00085 ATGGACAATTTAATGCTCAGGGGGCACAAGCATTCCATCTCCAGACCAACAAATGGTCCTCAAAGATCATCTCAGCAGCATTCAACTTACCAAATCCCTGCATCTGCTCTATATGAAAGTGCTGAAGTACCAGGTGCTTCTGGATCTTCAGTTCAAGCATTATCAGTTGGAGGGGCTCTGAAAGCTGCACATGAAGAAAAGTTGAGACAACCTAAGCATTCAAAAGATGAGATGCCTCCTCCTGCTTCTCCTTCACAGCCCTGCAACGATGCAGCAGCACAGAAAGCTGCAAAGGAGGCTGCGGAGAGGGCCAAAATCCAGGCTGATAATGTGGGCCACAGGCTTTTATCAAAAATGGGTTGGAAAGAAGGTGAGGGTCCTGGGGAGCTCCAGGAAGGGTATTCAGATCCTATCATGGCAGGCAATGTTAAGAAAGATAACTTGGGGGTAGGTGCTGTCCAACCTGGGGAGGTGACTCCTGAAGATGACATATATGAGCAGTACAAAAAGCGGATGATGCTTGGCTACGTTACAGACCCAATCCTCTGGTAA 552 0.4783 MDNLMLRGHKHSISRPTNGPQRSSQQHSTYQIPASALYESAEVPGASGSSVQALSVGGALKAAHEEKLRQPKHSKDEMPPPASPSQPCNDAAAQKAAKEAAERAKIQADNVGHRLLSKMGWKEGEGPGELQEGYSDPIMAGNVKKDNLGVGAVQPGEVTPEDDIYEQYKKRMMLGYVTDPILW 183
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi210g00085 183 MobiDBLite consensus disorder prediction 1 106 - -
Sebi210g00085 183 Pfam G-patch domain 109 152 IPR000467 GO:0003676
Sebi210g00085 183 SMART G-patch_5 106 153 IPR000467 GO:0003676
Sebi210g00085 183 PANTHER ARGININE/SERINE RICH SPLICING FACTOR SF4/14 87 176 IPR040169 -
Sebi210g00085 183 MobiDBLite consensus disorder prediction 62 76 - -
Sebi210g00085 183 MobiDBLite consensus disorder prediction 14 35 - -
Sebi210g00085 183 ProSiteProfiles G-patch domain profile. 108 155 IPR000467 GO:0003676
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi210g00085 104 164 C2H2 Transcription Factor Family AT5G26610 41.935 7.60e-08 49.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi210g00085 K13096 - gmx:100786213 219.55