LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Sebi210g00083	ATGCAATACACACAGCTCTTTTGTTTCATTTTAATGTTGCTAGTCCTTGCTTTTGATGGTAGTGAATCCCAGCAGAATTGTGTCTACCCACTCAAGACCATTACCGTTAGTCAATCAGGCAATGCAGATTTCAAAACAATTCAAAGTGCCATTGACTCTGTCCCTAACAAAAACTCTCAATGGATTCACATCCAAATTTCACCTGGTGCTTACAGAGAGCAAATCAAAATTCCCATGAATAAATCATGCATTTATCTTGAAGGAGCTGGTAGAGACTCAACGAGTATTGAATGGGGTGATCATTTGAAGCCTACTTTTCTAATTACAAGAGCAGATAATATTGTTGCAAAGGGCATTACTTTCATGAATACACTTAACAACCCTGTACTATTAGAGGGCACTAGTAACATCACACAAGCCTTGGCTGCATGGATCCATGGAGATAAATGTGCTTTCTTTAATTGTGCTTTTCTAGGGGTGCAAGACACCCTACGTGATCATTATGGCCGCCATTACTATCATAATTGCTACATTCAAGGTGGAGTTGATTTCATTTATGGGAACGGTCAATCAATCTTTGAGGCAAGTACAATATATTTTTCAATGGGGAAATCTGGTCCCAAAAAGGATGGGGCTATTACAGCACAAGATAGGGATTCGCCAAATGAAAGCAGTGGGTTTGTGTTTAAAAATTGTATCATAAACGGGACAGGTGGAAAGGCAGAACTTGGAAGAGCATTGGGTGCTTATTCCAGAGTCATCATAGCCAATTCATTCCTAACAGATGTGGTTAAACCTGAGGGATGGAGTCCTTGGACATATGTTGGCCATGAGTAA	837	0.399	MQYTQLFCFILMLLVLAFDGSESQQNCVYPLKTITVSQSGNADFKTIQSAIDSVPNKNSQWIHIQISPGAYREQIKIPMNKSCIYLEGAGRDSTSIEWGDHLKPTFLITRADNIVAKGITFMNTLNNPVLLEGTSNITQALAAWIHGDKCAFFNCAFLGVQDTLRDHYGRHYYHNCYIQGGVDFIYGNGQSIFEASTIYFSMGKSGPKKDGAITAQDRDSPNESSGFVFKNCIINGTGGKAELGRALGAYSRVIIANSFLTDVVKPEGWSPWTYVGHE	278

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Sebi210g00083	278	PANTHER	ACYL-COA THIOESTER HYDROLASE YBHC-RELATED	17	276	-	-
	Sebi210g00083	278	SUPERFAMILY	Pectin lyase-like	32	273	IPR011050	-
	Sebi210g00083	278	Gene3D	-	30	278	IPR012334	-
	Sebi210g00083	278	Pfam	Pectinesterase	34	273	IPR000070	GO:0030599\|GO:0042545

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Sebi210g00083	Sebi-Chr210	1274056	1275299	Transposed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Sebi210g00083	7	278	Carbohydrate Esterase	AT2G19150	44.404	1.93e-69	214

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Sebi210g00083	-		-	mtr:25501033	394.815