Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi210g00068 ATGGCAAATCATTCTGCAACATCCTCAGATTTCAGCTATGATGTTTTTCTAGGTTATTTTAATGGCGGAGTCTGCAACGCATTCATTGATCGTCTTTATCAAGCTTTGCTTGAAAAAGGAATCAATACCTTCAGAGATGGTGTAACTAGACCTGCCTTTGAGGAAATTGAAAAATCCAGATTGTCAATGCTTGTGCTCTGTGAAAAATATGCATCTTCTATAGAGTGCCTTGATGAAATAGTCAAAATCAGTGACTACATTGACAACAAAAGAAAACAGGTCACGGTGATTTTTTACAAAGTGGAACCATCAGAGGTACGTAAACAAAAGGATTCTTATGAAGCAGCGATGGACGAACATGAAAAGAGAAATGGACAAGACCCGGAGAAGATAGAAGTATGGAGGAAAGCTTTGACTAGAGTATGCGACATAAGCGGGGGAAGCATTAAAATTGAGGGAATAATGCTTCATCCCCCCACACATGAAGAAATAGATAATTGGAGTAATACTGCCTTCAAGAAGATGAAGAACCTCAGAATTCTTATTGTTTGGAATGCAAAGTTTTCCACAGGACCTAGTTATCTACCAAATAGTTTACGGCTACTTGATTGGACGGGGTTTCCATCACAGTCTTTTCCACCTGAATTTTATCCCGAGAGAATTGTTGACTTCAAGCTATCTCATAGTCCTCTGATATTTGCAGAGCTACTTCAGATATTTAAGGATTTGACATTCATCAATCTCTCCCAATGTCAATCCATAACTCAAATACCTAATCTGTCTGGAGCAAAAAACTTAAGAGTACTTACGCTTCACAGATGCCATAAATTGGAAGGGTTTGACAAATCCATTGGATTATATATGTCTAACCTAGTGTATTTAAGTGCATCAGAGTGTACCATGCTCAAAAGTTTTGTGCCAAAAATGTATTTCCCATCTCTGGAAGTTCTTTCATTTAACTTCTGCACAAGACTTGAACACTTCCCTGATGTAATGCGAAGGATGGATAAGCCATTAAAGATTCACCTGATAAATACTGCTATAAAGGAGTTTCCAGAGTCCATTGGTAAACTTACTGGGCTTGACTGTGGTGATGGCTCCTATCTTTTCGATGTCAGTGAAGATACTCCTCTTTTCTGGGCTCGTGGAAAGTTCCCCATTGTTGCATTAACCTTTGTGTTCGGTGAGATGAAGATGGATAGGTCGGAATTCTTCCCTGGAGTTGTATCAGCTGAGTCCCACAAGGTTGTTCTCCACTTATTCATAGACAACAAAGAAATATGTCACAAAGATTACCATTGTTGCAGTGTCGGGGAACATCATGTGTTACTGTGTGATCTACGAGTCTTGTTTAATAAAGAAGAGTGGCAGGGTCTTGATGCATGTATTGGAGATGATTGGAAGGCCGTTCAGGTTCAATGTGAGTCACACTTGGCTATGAGTCATTGGGGAGTTTATGTGTACAAGCAGAAAACAAACATGGATAATATCCTATTTAGTTTTCCCAATTCAACAGACCCCATGTCATCATCAAGTTTGGTCCCAAATAAAACTCCACATATACAACATCTTGATCTAGTAGAAGCATTTGGCCAATATTTACATACTTTTAAACTAGAACAATTTGCCTCTGTTGCAAATGAACTATTGAGGTGGTGGAGGAACACTGATGCTGGTGTTAGTGAGGAAGCTTCAGCCCTTGTCTATGGGACAAGTTTAATGCAAGAACACGAAGAGTTTGTGTGGCATGTGTCACGGATTTTAGAGATGTTGATGGAGATTACACCCAAACGTATAGATGATTCAAAATTTCAAAGTGCAGGCCAATTGGTGGTAGAATTATTGATGGCACGGGCACAACCTATGAAGAAAAAAGGCCATGAGACGTTGCACATCAATGTGAGTATGCCTATTATACTAGAGGAATGTGAATACCACCCTTGTACAGATCTAACAAAAGCTCCAAGGGGTCGCTATTGGGGAAGTGTGGTGCTAGAGCTAGAAGAAGGAGATCCACTTGTGTGGAGAATTTGGAAAAGCAAAAAAGCCATTGGGAAGAGGGTAAGCGTTGTTCTATCGAAATGCCAGCTTGCCTCTACAGAGGGTGCTTCAACCTCTGGCCATGGGGAAATTTTGGAGGAAGAATTCAAGGATCCTGCATTGGAAAAATTGATGAGGGGGATAGAGCAAGATGCAATGAGCTTGAATAAATCTCTTGGGAAGTTGAAGGCGACAATTGTTCCAAGAGATGTCCCAGTTTCTGACAAATACATGATGGAAACAACAATCATCAGAGCACAAGAAAGATTGGGAAGGTTGGGACCTAATTTCAAGAAGACACCTTATGGGAAGTTGAGGGTGGAGCACGATTCTCAGGGTACTATTCATATGCAGCATGAGTTGGGGGTGGAGCATGATGCTCAGAGCAGTACCCAGAATAAGTTGGGTCCGACCAAGATTCTTATTAGGTGGATTCAAAGCATCTGTACCCCCAAGTGA 2499 0.407 MANHSATSSDFSYDVFLGYFNGGVCNAFIDRLYQALLEKGINTFRDGVTRPAFEEIEKSRLSMLVLCEKYASSIECLDEIVKISDYIDNKRKQVTVIFYKVEPSEVRKQKDSYEAAMDEHEKRNGQDPEKIEVWRKALTRVCDISGGSIKIEGIMLHPPTHEEIDNWSNTAFKKMKNLRILIVWNAKFSTGPSYLPNSLRLLDWTGFPSQSFPPEFYPERIVDFKLSHSPLIFAELLQIFKDLTFINLSQCQSITQIPNLSGAKNLRVLTLHRCHKLEGFDKSIGLYMSNLVYLSASECTMLKSFVPKMYFPSLEVLSFNFCTRLEHFPDVMRRMDKPLKIHLINTAIKEFPESIGKLTGLDCGDGSYLFDVSEDTPLFWARGKFPIVALTFVFGEMKMDRSEFFPGVVSAESHKVVLHLFIDNKEICHKDYHCCSVGEHHVLLCDLRVLFNKEEWQGLDACIGDDWKAVQVQCESHLAMSHWGVYVYKQKTNMDNILFSFPNSTDPMSSSSLVPNKTPHIQHLDLVEAFGQYLHTFKLEQFASVANELLRWWRNTDAGVSEEASALVYGTSLMQEHEEFVWHVSRILEMLMEITPKRIDDSKFQSAGQLVVELLMARAQPMKKKGHETLHINVSMPIILEECEYHPCTDLTKAPRGRYWGSVVLELEEGDPLVWRIWKSKKAIGKRVSVVLSKCQLASTEGASTSGHGEILEEEFKDPALEKLMRGIEQDAMSLNKSLGKLKATIVPRDVPVSDKYMMETTIIRAQERLGRLGPNFKKTPYGKLRVEHDSQGTIHMQHELGVEHDAQSSTQNKLGPTKILIRWIQSICTPK 832
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi210g00068 832 SUPERFAMILY Toll/Interleukin receptor TIR domain 5 146 IPR035897 -
Sebi210g00068 832 Gene3D Ribonuclease Inhibitor 160 374 IPR032675 -
Sebi210g00068 832 SMART till_3 12 144 IPR000157 GO:0007165
Sebi210g00068 832 ProSiteProfiles TIR domain profile. 11 180 IPR000157 GO:0007165
Sebi210g00068 832 Pfam TIR domain 13 154 IPR000157 GO:0007165
Sebi210g00068 832 SUPERFAMILY L domain-like 157 361 - -
Sebi210g00068 832 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 152 341 IPR044974 GO:0006952
Sebi210g00068 832 Gene3D - 6 157 IPR035897 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi210g00068 Sebi-Chr210 1030206 1035084 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi210g00068 147 362 WRKY Transcription Factor Family AT4G12020 31.330 1.50e-18 89.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi210g00068 - - gsj:114379881 481.1