Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi210g00014 ATGTCGACATACTCTGTCTCAGTAAAAGGAAAATCCGTGTCAGAGTCAGACAATACTCCACAAACTGAGTACGATGTTTTTGTTAGCTTCAGGGGCGACGACATCCGCGACGGTTTTCTTAGCCACTTGATTGAGGCTTTTCATCGGAAGAAAATAAGAGCCTTTGTAGATGATAAACTTCAAATGGGAGATGCTTTGAACAAATCTTCTAATCAAGCAGGAATTAAGTCATCTGATTTTCGACATGATGGTGAACTTGTTGAAGAAGTCGTCAATCTTTTGTTGAAGAGATTGTGTAAATACCCACTTAACTCAAAAGGACTTATTCACTCAAAAAGACTTATTGGGATTGACAGACAAATGGCACATTTAGAATGGTTTTACGTCAAGAATCAGAACACCCTCGTGTTATTGGAATTTGGGGAATGGGTGGTATTGGCAAGACAACCATTGCAAGTGAAGTATGTAACAAACTACGGAGAAGTTGCGAAAATTGACACACCAAATGGGTTGTCCAATGGTATTGTGAGAAGGATTGATGGTATGAAGGTTCTTATTGTTCTTGAAGATGTGAATGATTCAGATCATTTGGAAAACTTATTATTGGAAGCTCGTGATATGCTTGGATCAGACAGTAGAATAATTATAACAACTAGAGATAAGCAAGTGCTTACTGCTTGCAAAGCTGATGCTATACACAAGGTTGGAGAGTTGAGTTGTAGTGAAGCACTTGAGCTTTTCAATTTGAATGCCTTTAACCAAAGTTATCGGGAAAAGGAGTATTATGAGCTATCAAAGAGGGTGGTTGATTATGCCAGTGGCATTCCATTAGTTCTTAAAGTTTTGGGATGTCTTCTTCACGGAAAAGATAAGGAAGTATGGGAAAGTCAACTAAACAAGCTTGAAAAAATGTCAAACAAAAAGTTTACGATGCTGAAAGATAAAGCTCTTGTAACTTTTTCTGAGGATAATATTAATGGTGTATCTATGCATGATATCATACGAGAAATGGCTTGGGAGATTGTTCGCCGAGAATCTAGTGAAGAACCTGGAAGCCGTAGTCGGTTATGGGATTTTGATGACTGTAGGGAAGTGCTGGAAAATGACAAGGGGACTGAGGCCATCAGAAGCATACGTGTGTTAAGTTCATCTTTGAAGTTAAGCCCCCATACATTTGCTAAGATGAGCAAACTAAAATTTTTGGATTACTATGGCTCTTGTGATTGTCCTCAAGGGCTTCAATCTTTGTCATCTGAACTAAGATATCTTCGTTGGGTTTATTACCCTCAGGCAACCTTACCACAGAAATTTTCTGCGGAAAAACTTGTTATATTGAACTTAGCTGCCAGACTTTTCCAAAGCTACAATCTTGAAGTACTAGAAGCTGAATATTGTAGGGAGTTGTCAGGGGTGCATTCATCTATTTTCTCTCTCAACAAGCTCAATACATTGGATCTTTGTTACTGCGGAAAAATTGCCACACTTACCAGTGATACCCATTCGAGCTCCATCAGTTATCTCAACGTTGATTGCTGTTATAGTCTAAGAGAATTCTCAGTGACATCAGAGAATATGAAAAAACTGGATTTAACAAACACTATGGTCAAAGCATTGCCCTCATCATTTGAACATCAAAGCAAGCTTGAAATCCCATGTCTAAGAAGCAGTTACATTAAGGATTTACCTTCATGCATGAAGAAACTTACAAGATTGCAATATCTGGACATAACAAATTGCGCTCGGCTTCAGACAATACCAGAGCTTCCCCCCTCCCTTGAAACTCTCCTTGCTGGAGGTAAATATGGACCAGGACAACTGGAGACTGTATGCTTCCCTACAGTTTCTGAACAATTCAAGGAAAATAGGAAATGGGTTGAGTTATGGAATTGCTTGGATTTGGATGAACACTCTCTCATGGCTATTGAGTTGAATGTGCAAATCAACATGGAGAAATTTGCACACCAACATCTATCTGCACCAAAACATGATTATGTTGAAAGTTACAATCTTGGATATGATTATGATGATTCTTATCAAGTTGTGTATGTGTATCCAGGAAGCAGTGTTCCAGAGTGGTTGGAGCATAGAACAATGGAGGGTTATATACTTATTGATCTCTCTTGTACTCCACATTCCCCTCAGTTGGGCTTCATTTTCTGCTTCATCCTCGAGGATTATCGATTCTTAAATGATGATCAGTTGCTATTTGAAATCACTATCAGTGATGGTAATGAAGAGGGTAGTGCCACAATGTGTACGTAG 2262 0.3882 MSTYSVSVKGKSVSESDNTPQTEYDVFVSFRGDDIRDGFLSHLIEAFHRKKIRAFVDDKLQMGDALNKSSNQAGIKSSDFRHDGELVEEVVNLLLKRLCKYPLNSKGLIHSKRLIGIDRQMAHLEWFYVKNQNTLVLLEFGEWVVLARQPLQVKYVTNYGEVAKIDTPNGLSNGIVRRIDGMKVLIVLEDVNDSDHLENLLLEARDMLGSDSRIIITTRDKQVLTACKADAIHKVGELSCSEALELFNLNAFNQSYREKEYYELSKRVVDYASGIPLVLKVLGCLLHGKDKEVWESQLNKLEKMSNKKFTMLKDKALVTFSEDNINGVSMHDIIREMAWEIVRRESSEEPGSRSRLWDFDDCREVLENDKGTEAIRSIRVLSSSLKLSPHTFAKMSKLKFLDYYGSCDCPQGLQSLSSELRYLRWVYYPQATLPQKFSAEKLVILNLAARLFQSYNLEVLEAEYCRELSGVHSSIFSLNKLNTLDLCYCGKIATLTSDTHSSSISYLNVDCCYSLREFSVTSENMKKLDLTNTMVKALPSSFEHQSKLEIPCLRSSYIKDLPSCMKKLTRLQYLDITNCARLQTIPELPPSLETLLAGGKYGPGQLETVCFPTVSEQFKENRKWVELWNCLDLDEHSLMAIELNVQINMEKFAHQHLSAPKHDYVESYNLGYDYDDSYQVVYVYPGSSVPEWLEHRTMEGYILIDLSCTPHSPQLGFIFCFILEDYRFLNDDQLLFEITISDGNEEGSATMCT 753
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi210g00014 753 Gene3D Ribonuclease Inhibitor 373 524 IPR032675 -
Sebi210g00014 753 SUPERFAMILY Toll/Interleukin receptor TIR domain 14 91 IPR035897 -
Sebi210g00014 753 Pfam TIR domain 24 69 IPR000157 GO:0007165
Sebi210g00014 753 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 173 605 IPR044974 GO:0006952
Sebi210g00014 753 PRINTS Disease resistance protein signature 272 286 - -
Sebi210g00014 753 PRINTS Disease resistance protein signature 178 192 - -
Sebi210g00014 753 PRINTS Disease resistance protein signature 566 582 - -
Sebi210g00014 753 ProSiteProfiles TIR domain profile. 22 183 IPR000157 GO:0007165
Sebi210g00014 753 Gene3D Ribonuclease Inhibitor 525 670 IPR032675 -
Sebi210g00014 753 Gene3D - 237 321 IPR042197 -
Sebi210g00014 753 Gene3D - 18 80 IPR035897 -
Sebi210g00014 753 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 159 308 IPR027417 -
Sebi210g00014 753 Gene3D - 147 233 IPR027417 -
Sebi210g00014 753 Pfam NB-ARC domain 171 307 IPR002182 GO:0043531
Sebi210g00014 753 SUPERFAMILY L domain-like 330 595 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi210g00014 Sebi-Chr210 243293 246485 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi210g00014 178 587 WRKY Transcription Factor Family AT4G12020 29.622 9.74e-48 181
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi210g00014 - - aprc:113850949 634.795