Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi20g00271 ATGATCCAACATAGGCCTTACACACAAAAAGTGGATGTTTATAGCTTTGGGATTGTCCTGTGGGAGCTCATCACTGGTATGCTTCCATTTCAGAACATGACAGCAGTACAGGCAGCATTTGCAGTTGTCAACAAAAATGTTCGCCCAATCTTGCCTAATGATTGCTTACCGGTTCTCCGTGAGATCATGACAAGATGCTGGGATCCCAACCCTGATGTTAGGCCACCATTTACTGAAATTGTAGGAATGCTTGAGAACGCAGAGACTGAGATCATGACAACAGTTCGGAAGGCTCGGTTCAGGTGTTGCATGACTCAACCAATGACTGCTGATTGA 336 0.4524 MIQHRPYTQKVDVYSFGIVLWELITGMLPFQNMTAVQAAFAVVNKNVRPILPNDCLPVLREIMTRCWDPNPDVRPPFTEIVGMLENAETEIMTTVRKARFRCCMTQPMTAD 111
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi20g00271 111 Gene3D Transferase(Phosphotransferase) domain 1 1 109 - -
Sebi20g00271 111 SUPERFAMILY Protein kinase-like (PK-like) 2 84 IPR011009 -
Sebi20g00271 111 Pfam Protein tyrosine and serine/threonine kinase 2 83 IPR001245 GO:0004672|GO:0006468
Sebi20g00271 111 PANTHER SERINE-THREONINE PROTEIN KINASE 4 89 - -
Sebi20g00271 111 ProSiteProfiles Protein kinase domain profile. 1 92 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi20g00271 Sebi-Chr20 3075808 3076143 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi20g00271 1 111 MAP Kinase Kinase Kinase AT2G24360 81.081 1.04e-64 199
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-4 Sebi20g00271 PK_Tyr_Ser-Thr 1.4e-19 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi20g00271 - - adu:107490079 229.18