Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi20g00268 ATGATTGACATAGGCGTCGGGTCAGTAGGACATGATTCCGGTGCACCAACGACTCCATTAGGTTCGAGTCCCATGAATATCAAAGATCTTCGCCAAAGTGCTGGATACAGCAACGTTGATATTTTTACCTACGAAGAGCTGAGGCTTGCCACAAAGCACTTTCGTCCCGATTTAATCCTGGGAGAAGGTGGCTTTGGAGTTGTATATAAAGGAGTCATAGATGATAGTGTCAGGGCAGGTTACAAATCCACGGAAGTCGCCATTAAGGAGCTTAATCGCGAAGGTTTTCAAGGCGATAGGGAATGGCTCGCTGAAGTTAACTATTTAGGTCAATTCAGTCACCCAAATCTTGTGAAGCTCATTGGATACTGCTGCGAGGATGAACACCGGTTGTTGGTCTATGAATACATGGCGAGTGGGAGCTTGGAGAAACATCTCTTTCGCAGTAAGCTTTGCGTGAAATTGCAAATGAATCTTATTTTTGAATTGGACTAA 495 0.4444 MIDIGVGSVGHDSGAPTTPLGSSPMNIKDLRQSAGYSNVDIFTYEELRLATKHFRPDLILGEGGFGVVYKGVIDDSVRAGYKSTEVAIKELNREGFQGDREWLAEVNYLGQFSHPNLVKLIGYCCEDEHRLLVYEYMASGSLEKHLFRSKLCVKLQMNLIFELD 164
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi20g00268 164 MobiDBLite consensus disorder prediction 1 24 - -
Sebi20g00268 164 FunFam Serine/threonine-protein kinase BIK1 21 136 - -
Sebi20g00268 164 Pfam Protein tyrosine and serine/threonine kinase 59 157 IPR001245 GO:0004672|GO:0006468
Sebi20g00268 164 PANTHER OS01G0588500 PROTEIN-RELATED 33 159 - -
Sebi20g00268 164 ProSiteProfiles Protein kinase domain profile. 54 164 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi20g00268 164 ProSitePatterns Protein kinases ATP-binding region signature. 60 89 IPR017441 GO:0005524
Sebi20g00268 164 Gene3D Phosphorylase Kinase; domain 1 28 136 - -
Sebi20g00268 164 SUPERFAMILY Protein kinase-like (PK-like) 36 152 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi20g00268 Sebi-Chr20 3007810 3008601 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi20g00268 41 147 Glycoside Hydrolase AT3G07070 48.598 5.62e-28 105
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Sebi20g00268 PK_Tyr_Ser-Thr 3.9e-18 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi20g00268 - - vum:124848880 259.225