Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi20g00257 ATGGCAGGTGCTATGAAGAAAGTCGACAAGATTCGCCAAATCGTTCGTCTAAAACAGCTCATGATGCGGTGGAAGCACATCAGTCTCCGCCGCCGTTCCCTCCCCTCCGAACCGGAGCCATGTTCCGCCGCTCGACGGCCACCCTCCGGTTTCCTCTTCGTCTACATCGGACCCGAACGCAAGCGTTTTGCCATCCCTGCTCGTTTCCTTAACCTCCCCGTATTCTCGGGTCTCCTCGACGAAACCGAGGAGGAGTTTGGGCTCCGAGGTAATGGTGGTTTGGTTCTGCCCTGTCAAGTGGGTTTCTTCAGACACATCATCAAGCATCTCCACAAGGACGAACACAAGTTCGGGAAACTCTCTCTGGAAGAGTTTGTTAAAATGTTCTCTGAGATGGCTTCAGATTATCCTTGCAAGGAAAACGTCGTCGCTTTTGTTCCTCTGTTGCAGAAAGCAGAGGTTTAG 465 0.5226 MAGAMKKVDKIRQIVRLKQLMMRWKHISLRRRSLPSEPEPCSAARRPPSGFLFVYIGPERKRFAIPARFLNLPVFSGLLDETEEEFGLRGNGGLVLPCQVGFFRHIIKHLHKDEHKFGKLSLEEFVKMFSEMASDYPCKENVVAFVPLLQKAEV 154
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi20g00257 154 Pfam Auxin responsive protein 16 109 IPR003676 GO:0009733
Sebi20g00257 154 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 35 106 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi20g00257 Sebi-Chr20 2855634 2856098 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi20g00257 7 108 Calmodulin-binding Proteins AT3G43120 30.827 9.29e-20 79.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi20g00257 K14488 - gmx:100797463 224.942