Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi20g00240 ATGAGCAACTTGAGTACTTGTGTTGTAAGGAGCTCTGATCTGATAGATTCAAAGCTGGAAGAGCATCAGTTATGTGGATCCAAACAGTGTCCTAGTTGTGGACACAAGTTTGAAGGGAAGCCGGATTGGCTAGGTCTACCAGCAGGAGTGAAGTTTGATCCAACAGACCAAGAACTCATAGAACATCTTGAAGCCAAAGTAGAGGCAAAGAACATGAAATCACACCCTTTGATAGATGAGTTCATTCTTACTATTGAAGGAGAAGATGGGATTTGTTATACCCATCCTGAGAAACTTCCAGGAGTAACAAGAGATGGATTGAGCAAACACTTTTTCCATAGACCTTCAAAGGCATACACAACAGGGACAAGGAAGAGGAGAAAGATTCAAAATGAATGTGACTTGCAAGGAGGAAGAAACCAGATGGCACAAGACTGCATGAAGAAGAGAAAGAAGGAGAGCTTGTGGTGTCAAAGATATTCTATCAGACACAGCCAAGGCAATGCAATTGGTCAGATTCATAGAATAACTGGTGAAGGAGAAGCTTCTAGAGGAAGAGAAGTGCAAGCATGTGAAGAAGAAGGGCATCAACAGGTTGCAACGACAGCGTTTCATATAAGTAGGCCTTCTCATGCGATCTCTCCACCGCCTCTCCATCACACATCCATCATCTTAGACGACAACTCTTACCATATAATGCTCCAAAATCAAAATTTTCACCAGCAGCAACAAGCTGAACATCATAAACTTGGAGGAAGGTCTGCGTCGGGTTTGGAGGAACTCATAATGGGGTGCACTACTTCAACGGATCATATCAAAGAGGAGTCATCCATTAGAAATCCAGAAGAAGCTGCTGAATGGATGAAGTACTCATCTTACTGGCCAGATCATCATCATCATGAGTAA 906 0.4272 MSNLSTCVVRSSDLIDSKLEEHQLCGSKQCPSCGHKFEGKPDWLGLPAGVKFDPTDQELIEHLEAKVEAKNMKSHPLIDEFILTIEGEDGICYTHPEKLPGVTRDGLSKHFFHRPSKAYTTGTRKRRKIQNECDLQGGRNQMAQDCMKKRKKESLWCQRYSIRHSQGNAIGQIHRITGEGEASRGREVQACEEEGHQQVATTAFHISRPSHAISPPPLHHTSIILDDNSYHIMLQNQNFHQQQQAEHHKLGGRSASGLEELIMGCTTSTDHIKEESSIRNPEEAAEWMKYSSYWPDHHHHE 301
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi20g00240 301 PANTHER NAC DOMAIN-CONTAINING PROTEIN 73 10 134 IPR044799 GO:0003700
Sebi20g00240 301 SUPERFAMILY NAC domain 42 130 IPR036093 GO:0003677|GO:0006355
Sebi20g00240 301 Gene3D NAC domain 55 171 IPR036093 GO:0003677|GO:0006355
Sebi20g00240 301 ProSiteProfiles NAC domain profile. 46 206 IPR003441 GO:0003677|GO:0006355
Sebi20g00240 301 Pfam No apical meristem (NAM) protein 47 142 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi20g00240 Sebi-Chr20 2587008 2589450 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi20g00240 178 294 NAC Transcription Factor Family AT5G56620 33.577 3.79e-08 52.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Sebi20g00240 NAM 2.6e-12 No_clan