Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi20g00237 ATGTCGTGGCAAACTTACGTCGATGAACATTTGATGTGCGATATTGATGGCACAGGCCACCATCTCTCCGCCGCTGCCATCATCGGCCATGATGGCTCCGTCTGGGCTCAGAGCTCTTCCTTCCCTCAGTTTAAGGGTCAGGAGATCAGTGATATCATGAAAGATTTCGACGAACCCGGTCATCTTGCTCCTACAGGCTTGCACCTTGGAGGAGTCAAATACATGGTCATCCAAGGAGAGTCTGGAGCTGTCATCCGGGGCATCACCATAAAGAAAACTGGTCAAGCTCTAGTTTTTGGCCTCTATGAGGAACCTGTCACTCCTGGACAATGCAACATGGTTGTTGAGAGGTTGGGAGATTACCTCATCGATCAGGGTCTCTAG 384 0.5026 MSWQTYVDEHLMCDIDGTGHHLSAAAIIGHDGSVWAQSSSFPQFKGQEISDIMKDFDEPGHLAPTGLHLGGVKYMVIQGESGAVIRGITIKKTGQALVFGLYEEPVTPGQCNMVVERLGDYLIDQGL 127
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi20g00237 127 SUPERFAMILY Profilin (actin-binding protein) 2 126 IPR036140 -
Sebi20g00237 127 CDD PROF 2 126 IPR005455 GO:0003779
Sebi20g00237 127 PRINTS Profilin signature 42 62 IPR005455 GO:0003779
Sebi20g00237 127 PRINTS Profilin signature 96 109 IPR005455 GO:0003779
Sebi20g00237 127 PRINTS Profilin signature 23 32 IPR005455 GO:0003779
Sebi20g00237 127 PRINTS Profilin signature 3 12 IPR005455 GO:0003779
Sebi20g00237 127 PRINTS Profilin signature 109 126 IPR005455 GO:0003779
Sebi20g00237 127 PANTHER PROFILIN 1 126 IPR005455 GO:0003779
Sebi20g00237 127 ProSitePatterns Profilin signature. 1 8 IPR027310 GO:0003779
Sebi20g00237 127 SMART prof_2 1 127 IPR005455 GO:0003779
Sebi20g00237 127 FunFam Profilin 1 127 - -
Sebi20g00237 127 PRINTS Plant profilin signature 29 42 IPR005455 GO:0003779
Sebi20g00237 127 PRINTS Plant profilin signature 100 113 IPR005455 GO:0003779
Sebi20g00237 127 PRINTS Plant profilin signature 113 126 IPR005455 GO:0003779
Sebi20g00237 127 PRINTS Plant profilin signature 1 14 IPR005455 GO:0003779
Sebi20g00237 127 Gene3D Dynein light chain 2a, cytoplasmic 1 127 - -
Sebi20g00237 127 Pfam Profilin 1 126 IPR005455 GO:0003779
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi20g00237 Sebi-Chr20 2540972 2541536 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi20g00237 1 127 Cytoskeleton Gene Families AT4G29340 82.090 4.34e-79 227
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi20g00237 K05759 - gmx:100784770 244.202