Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi20g00227 ATGGAAGAACCTTTGGAGGATGGGCAACTCGAACGAGTCGACTCCGAGTTGACGTCCAGCAGCACTGGTTCGGGCATTTCCTCCATACTCAACAGCTCAGACGATTTTCGTAACATCACCAGCTCCGGCGACATTTCCTCCATCAGCAGCGGCTCAGGCGAGATTCCGGCCGTCGCGGTCAACCACGCGGTTCTTGCGCCTCCGCTGCCTGCCGCATCGACAGCGGTGAGGGAGAAGTGCGTGGGAAGGAGTAACAAGGGACTGAGTTGGGGACATACCTCGGTGATTGGGAGGCGGAAAGAGATGGAGGACGCCGTCGCCGTTATTCCAGGATTCATGTCCCGCACGTGCGATCACATCGGCGGTTGCACGGCTCCCGGTTCCAGATCCTCCGGTGAGATCGCTCCCGTTCATTTTTTCGGTGTGTACGACGGCCACGGTGGCTCTCAGGTGGCTAAATTTTGTGCCAGACGGATGCACGATGTTATAGCAGAGGAGTGGGACCGAGAAATTGCAGGTGGCGCTGAATGGAGGAGAAGGTGGGAAGCAGTATTTGCTAATGGCTTTGAGAGGACTGACAATGAAATCTTATCAGACGCAGTTGCACCAGAAATGGTTGGATCTACTGCCTCCGTGGTGGTTCTATCTTGTTGCCAAATTATTACATCCAACTGCGGCGACTCAAGGGTTGTTCTTTGCCGCAAGACTCAAACAATCCCCTTGACAGTGGATCAGAAGCCTGATAGACAAGATGAACTCATGAGAATTGAAGGAGGAGGAGGAAAAGTCATAAACTGGAATGGAGCTAGGGTGTTTGGAGTTCTTGCCATGTCCAGGGCCATAGGTGATCGGTACTTGAGACCATGGATTATTCCGGTGCCGGAGATAACTTTTACAGCAAGAACGGACGAGGATGAGTGCTTAATTTTGGCAAGTGATGGACTGTGGGATGTAATGACAAATGAAGAGGTTGGAGAAGTAGCGCGCCACATTCTAAGAAGGCGCCGCAGAACCTTGTCAATGGAGGAAACATCTCCAGCACAAGTTGTTGCTGATAGCCTGACTGAAATTGCATATGGTAGAAATAGTAAAGATAACATTTCAATCATAGTTGTTGATCTGAAATCAAAGAGAAAACGTCAGCCAAGGCCTCCTTAG 1158 0.5095 MEEPLEDGQLERVDSELTSSSTGSGISSILNSSDDFRNITSSGDISSISSGSGEIPAVAVNHAVLAPPLPAASTAVREKCVGRSNKGLSWGHTSVIGRRKEMEDAVAVIPGFMSRTCDHIGGCTAPGSRSSGEIAPVHFFGVYDGHGGSQVAKFCARRMHDVIAEEWDREIAGGAEWRRRWEAVFANGFERTDNEILSDAVAPEMVGSTASVVVLSCCQIITSNCGDSRVVLCRKTQTIPLTVDQKPDRQDELMRIEGGGGKVINWNGARVFGVLAMSRAIGDRYLRPWIIPVPEITFTARTDEDECLILASDGLWDVMTNEEVGEVARHILRRRRRTLSMEETSPAQVVADSLTEIAYGRNSKDNISIIVVDLKSKRKRQPRPP 385
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi20g00227 385 PANTHER PROTEIN PHOSPHATASE 71 374 IPR015655 GO:0004722|GO:0006470
Sebi20g00227 385 CDD PP2Cc 91 374 IPR001932 -
Sebi20g00227 385 SMART PP2C_4 79 372 IPR001932 -
Sebi20g00227 385 FunFam Protein phosphatase 2C 51 82 382 - -
Sebi20g00227 385 SUPERFAMILY PP2C-like 82 375 IPR036457 -
Sebi20g00227 385 MobiDBLite consensus disorder prediction 1 29 - -
Sebi20g00227 385 Pfam Protein phosphatase 2C 97 367 IPR001932 -
Sebi20g00227 385 ProSiteProfiles PPM-type phosphatase domain profile. 89 374 IPR001932 -
Sebi20g00227 385 Gene3D - 79 383 IPR036457 -
Sebi20g00227 385 ProSitePatterns PPM-type phosphatase domain signature. 139 147 IPR000222 GO:0043169
Sebi20g00227 385 MobiDBLite consensus disorder prediction 14 29 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi20g00227 Sebi-Chr20 2405875 2411217 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi20g00227 90 384 PP2C-type Phosphatase Gene Family AT4G26080 50.794 5.11e-100 302
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi20g00227 K14497 - gmx:100793293 628.632