Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi20g00211 ATGCTCAAGCAAACAACTCCAACAGTTCCACCTCCATGGAATTTTGGCCTGAAAGCATCCAAGCTGTTCAGACAAGATGGTAGCTCCATGAGAGTCATGGCATCTGGGAACGTGTCCCAATCAGTAACACCTGCTTCATCAGAAAATGTACTAGATTGGGTCAAACAGGACAAGCGAAGAATGCTTCATGTTGTGTATCGTGTTGGGGACTTGGACAGGACCATAAAATTTTATACGGAGTGCCTGGGAATGAAGCTCCTCAGAAAGCGTGACATACCAGAGGAGAGATATACCAATGCCTTTCTTGGATACGGCCCTGAGGACTCACACTTTGTTATTGAACTTACATACAATTATGGAGTTGACAAGTATGATATTGGAACTGGATTTGGTCATTTTGGTATTGCTGTTGATGATTTGGTGGCCTTTATTCTCAATCTTACGGGACTAGTCCAGTTGCATCTTCTTTATTCTATTGCGGTTTGGGCATGGAATGGAGGTGCTGTTTTGATTGTAAAAACAGTGGAGCTAATAAGAGCTAAGGGTGGCAAAATAACTAGAGAGCCTGGTCCTGTCAAGGGAGGCAAAACAGTAATTGCATTTATTGAAGATCCTGATGGTTACAAATTTGAACTTTTGGAAAGAGGTCCCACTCCTGAGCCTTTGTGCCAAGTAATGCTTCGAGTGGGTGATCTTGACCGTTCCATAGAATTTTATGAGAAGGCTTTTGGGATGGAGCTGCTTCGAAAACGTGATAATCCAGAATACAAGTATACCATAGCAATGATGGGTTATGGTCCAGAAGATAAAAGTACTGTTCTAGAGTTGACTTACAACTATGGAGTCACTGAATATGATAAAGGAAATGCTTATGCTCAGATTGCAATAGGAACAGATGATGTGTACAAAACTGCAGAAGCAATTAAACTAGTCGGGGGAAAAGTTACTCGGGAACCTGGACCTTTACCTGGTATCAACACAAAAATTACTGCATGCTTGGATCCTGATGGTTGGAAGTCGGCCAAGAGGGTTGAGCTGAGTGACAGAAAGTTTGGAGAAGAGAGCAGAGAAGGAAGGGATTCAATGGGAAACGACGAAGATCAAACCCAAAAGCAGAACAGTAAAAAGCGCAAGCAAGTTTTCCCATACGGCAATTACAGGAGTTACTACGGCTATCGTATTGGTCAAGGCGTGGATGAAGATCCTCGGTTGAAAGTGTTTAGGAAGGAGTGGTTTGAAGGCAAGGACTGTCTTGATATTGGCTGTAACAATGGGATAATCACCATCCAGATTGCACAGAAGTTTCACTGCCGGAGCATTCTTGGAATTGACATTGATTCTGATCGAGTTCAGGATGCATATTGGAACCTGAGAAAAACTGCTAGGTTGAAATCTACTGGAAATAAACCTGCAAAGGCTGCCAAACTCAACGACCAGGATCATGCAGACAATTCAGAGAATAGTGTTACTGTATTGTCAAATGCCAATGCAAAAAAGATTTCAGAGGAACCTCCTTTGGAGCAAACCGATCTGCTTGATATAGTTTCATTTAAACGAGAAAATTTTGTTCAGAGTAGGCACCCACCAGGAAAGCACTATGATACAATTATTTGTTTGAGTGTAACAAAATGGATACATCTAAATTGGGGGGATGACGGCTTAATTACATTATTTGCAGAGACTTGGAAGCTGCTCCGACCAGGTGGCATTCTTGTGTTGGAACCTCAGCCATGGAAGTCATATGAAAGTAACCGTCTTGTCTCAGAGCTACATATCACTTGCCAAAAACAAGGGGCTATTGAATCATTTTTTCCTTTCCCCATCATGCAGACCACTGCTGCCAACTACCGCAATATTATGTTTCGTCCAGAACAGTTTCAGGAAATACTGCTAGATAAGATTGGATTTAGAACAGTAGAAGAGATCACTGCAGGTTTGACAGGTAGCAAGACTGGTTTCAATAGACCAATTTTGGTTTTTCAGAAATGA 1989 0.4198 MLKQTTPTVPPPWNFGLKASKLFRQDGSSMRVMASGNVSQSVTPASSENVLDWVKQDKRRMLHVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEERYTNAFLGYGPEDSHFVIELTYNYGVDKYDIGTGFGHFGIAVDDLVAFILNLTGLVQLHLLYSIAVWAWNGGAVLIVKTVELIRAKGGKITREPGPVKGGKTVIAFIEDPDGYKFELLERGPTPEPLCQVMLRVGDLDRSIEFYEKAFGMELLRKRDNPEYKYTIAMMGYGPEDKSTVLELTYNYGVTEYDKGNAYAQIAIGTDDVYKTAEAIKLVGGKVTREPGPLPGINTKITACLDPDGWKSAKRVELSDRKFGEESREGRDSMGNDEDQTQKQNSKKRKQVFPYGNYRSYYGYRIGQGVDEDPRLKVFRKEWFEGKDCLDIGCNNGIITIQIAQKFHCRSILGIDIDSDRVQDAYWNLRKTARLKSTGNKPAKAAKLNDQDHADNSENSVTVLSNANAKKISEEPPLEQTDLLDIVSFKRENFVQSRHPPGKHYDTIICLSVTKWIHLNWGDDGLITLFAETWKLLRPGGILVLEPQPWKSYESNRLVSELHITCQKQGAIESFFPFPIMQTTAANYRNIMFRPEQFQEILLDKIGFRTVEEITAGLTGSKTGFNRPILVFQK 662
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi20g00211 662 MobiDBLite consensus disorder prediction 349 374 - -
Sebi20g00211 662 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 410 580 IPR029063 -
Sebi20g00211 662 ProSiteProfiles Vicinal oxygen chelate (VOC) domain profile. 60 215 IPR037523 -
Sebi20g00211 662 SUPERFAMILY Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase 59 218 IPR029068 -
Sebi20g00211 662 Gene3D - 218 348 IPR029068 -
Sebi20g00211 662 ProSitePatterns Glyoxalase I signature 2. 127 139 IPR018146 GO:0004462|GO:0046872
Sebi20g00211 662 FunFam Lactoylglutathione lyase 218 351 - -
Sebi20g00211 662 CDD GlxI_Ni 222 339 - -
Sebi20g00211 662 CDD AdoMet_MTases 418 574 - -
Sebi20g00211 662 ProSiteProfiles Bin3-type S-adenosyl-L-methionine (SAM) domain profile. 401 662 IPR024160 GO:0008168
Sebi20g00211 662 CDD GlxI_Ni 61 213 - -
Sebi20g00211 662 Pfam Bicoid-interacting protein 3 (Bin3) 533 662 IPR010675 GO:0008168
Sebi20g00211 662 ProSiteProfiles Vicinal oxygen chelate (VOC) domain profile. 221 345 IPR037523 -
Sebi20g00211 662 ProSitePatterns Glyoxalase I signature 1. 224 245 IPR018146 GO:0004462|GO:0046872
Sebi20g00211 662 SUPERFAMILY Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase 222 338 IPR029068 -
Sebi20g00211 662 MobiDBLite consensus disorder prediction 466 488 - -
Sebi20g00211 662 Pfam Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 61 143 IPR004360 -
Sebi20g00211 662 Pfam Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 224 338 IPR004360 -
Sebi20g00211 662 Pfam Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 172 212 IPR004360 -
Sebi20g00211 662 Gene3D Vaccinia Virus protein VP39 380 662 IPR029063 -
Sebi20g00211 662 MobiDBLite consensus disorder prediction 349 377 - -
Sebi20g00211 662 PANTHER LACTOYLGLUTATHIONE LYASE 171 341 - -
Sebi20g00211 662 Gene3D - 31 216 IPR029068 -
Sebi20g00211 662 ProSitePatterns Glyoxalase I signature 1. 63 84 IPR018146 GO:0004462|GO:0046872
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi20g00211 Sebi-Chr20 2235089 2244090 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi20g00211 224 338 Calmodulin-binding Proteins AT1G08110 27.143 4.79e-10 58.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi20g00211 K01759 - qsu:112025525 543.117