Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi20g00197 ATGGATAAGCTTGACACTAATCGAGCTGAAGCTACCGCACTATGCAGCGGCATCATTGATTCCCAGCTACCCAACTCCACTGGGGTGAGTGTGGATTTGAGGTCGAGAGAGAAAGATGGTTTGGTGAACTTGTTGCGAGCAAGAGTCTGTAACCGAGACGATAACCTACACAAAACGTTTGATGATGCCATTGTTGTTGAGCTGAATGGAGGAGAAGGTGGGAAGCAGTATTTGCTAATGGCTTTGAGAAGAACTGACAATGAAATCTTATCAGACGCAGTTGCACCAGAAATGGTTGGATCTACTGCCTCCGTGGTGGTTCTATCTTGTTGCCAAATTATTACATCCAACTACGGCGACTCAAGGGTTGTTCTTTACCGCAAGACTCAAACAATCACCTTACTTAACAGTGGATCAGAAGGTATAGTGAGAATAAGATTATATGTGAGATGTAACCTTCGCCGCCACTCTGCTTCCCCAGAATCCTCAAAGCTCAGTGATACAACACAAGTGCAACGATGCCGTTTCAAGTCTCACAGCATTTTCTCAAAAACCATTCCTAATGAGTGTAAGGTTATTTTAAATTTCGGTATAGTTGATTTTTAG 606 0.4323 MDKLDTNRAEATALCSGIIDSQLPNSTGVSVDLRSREKDGLVNLLRARVCNRDDNLHKTFDDAIVVELNGGEGGKQYLLMALRRTDNEILSDAVAPEMVGSTASVVVLSCCQIITSNYGDSRVVLYRKTQTITLLNSGSEGIVRIRLYVRCNLRRHSASPESSKLSDTTQVQRCRFKSHSIFSKTIPNECKVILNFGIVDF 201
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi20g00197 201 SUPERFAMILY PP2C-like 64 134 IPR036457 -
Sebi20g00197 201 Gene3D - 41 164 IPR036457 -
Sebi20g00197 201 Pfam Protein phosphatase 2C 80 134 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi20g00197 Sebi-Chr20 2079249 2080068 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi20g00197 72 134 PP2C-type Phosphatase Gene Family AT5G57050 42.857 3.36e-07 47.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi20g00197 K14497 - gmx:100782634 90.1225