Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi20g00195 ATGTATAAATCATTTGTGACATGTGATGATCCAAAAGGAGTTGTGCAATGTGGAACTATCAGGAAATACAGGAGGACTTATTCTCAGAAAATGAAGGACAAGATCAAAATCCAGAAGACACCTGAAAACATAGAAACATCCTTGATGAATACAAGATACAAAGAAGGCAAGATCCTAAAAGGATCCAGTGAAAACCTCACTGATCCATCATCTCTGCACCTCATACAGGTCTCTAGGGGGGACCAAAGTTTGAACAGCATGATTGATTCATGGTCTAGCAATTTTATGTATGATGGAAGGTCTAAAGATACTGCAAAAAGTTTGTTAAAAGGAGTTCTTAATATGCAAGATTCTCTAATCATGCTTAGCAAGTTGCAAGAGGCTTCACAACATACAGCTCGTTCCAAGAGAAAACACACTGAGAAACCTAAAAGAGATAAGATTGATGCAAAGATGATTGGTAGAATGCATGCCAATCAATTTAGTGAACAAAGTAATCCAAAGAGATATCAAAGAGCTCAGCCTTCTGCAGATGATGGTTCTTCAAGTAAATTAATTAAGGAGAGTTTGATTAGGCAAAATCTGTTTCCATTTCCAAACACAACTCCTATAAGCCCAAGCCAATCTTCTGGGGTTAGCACTCACAGGTTTGCTGATCCTTCTTTCTCACTAACACCTTCAAAAGGACCCAATCTAGTTGCCAAGTTGATGGGTTTAGAAGAAGTCCCCTCAAAATCATTTCCTGCTATAATGCAGAAACCTTTGGATGGTGAAAAGATTATGCTGAAGGTTAAAAGGAATAAATATAGAGCTGAGATTGAGAAGGTTAATCCAGAACAAAAGGTCCTGAGAGAAACTTCTGACACTGTGCATCTCAAAGGACAGAATTTTGTCAAAGAGCCAAAGCTTCTGGTCCATCATTTCAGTGATCCCAATTCCAAGCAGTTTGATAATTTATCTCCTATTGTACTCATGAAACCTCAATGTACTTCATGCCAAGAATCAGTAAAAACCCATATCCCAGTTCCTCCTGAAGAGTTATCCATTAGAAAACTGAGAGAGGAAATAATCTCTTCCAAAACTATCAGACAAAGAAAAGGTTCCAGTTCCAGTTCCACCAACATGGACAAAGAAATGGAAAAAGATGTGAGGAGACGGCTTACCAAAGAGAAAAGACCTGAGTTTCTCAAAGAGGTTGTGAAACTGGATGCAAAAGGAATCAATCCTATGGAAAAAACTTCTGGTAAGTTAAAACTGTATTGTCAGGTTAGTCACACATCACAGGCAAATGAGACAATTGATAAAAAATGTAAGGTACAGATCATTAGTAGAAAACTGCCAGAAAAGGATATCTCAGTGCCTAGAATTGTGGCAATACCTCAAGATCAAAGAGAAATCACCTCCACAAAATTGAGGAAGCCACCAAATTGGTCCAGAGTCGACAAAAATGAGATTTTCTTCCTAGAGAGCACAGATTCAAACACAATCTTCATCTCTAAAAAAGAGTCACAAAAAATTACTAATTCCAAGGACCTTAGTATGGAGATTAAAGAATCTGATTCTGTGCTAAATTCCTTAACACGTAGAAAGAATCAGCTGAAGAACCAAACTCCCAGTGCTGAGCCTGAAGCAGCTAAATCAATTGCTGAACAAATGGGGCTTGGAAAAGAGAAGAAAAGTATAGGTGTTCCTGGTAAGGATGATTCTGCAGAGATTAGAATCACCACAGTACAAGCAGATGAACTCATGATGAGGCGTGAAGCACTTGCCTATGAAAATAAGAATAGAGGATGTAAGAGGAGAAAGAGTTCTTCAGGAAATGACATTATGCTGCTAAAGTCTGAACATGAAAATGATTCTATCTTTGTTAAAGAAGCTCCTGATAGCATTCCTGACAAAGAGGGAGATAAGCTAAAACATTTTCTTTTAACCAGTGAATCATTTATTAGACATGCAGAGAAGCTGTTCAATCTTGATGTGGATTGTCCTAAGATCCTACAAAAAAATGAAACTAAAGGGATAGACAATCTCAGGCTTTATTTGGAATGTGCAAATGAACTTAGTGAGTGTAAAAGCCTTCAAGAGTCACAAGTAGTGCGTTCTTTGTTGCTAACTTGTGTGGGGAACTCAAGATTACTTGTCTCTTTAAGAAGGCTGGTTGAAGAAATCTATGATGCCATTGAGAATCTGAAATTTTATAGTGAGAGTTGTGGGGAGAAACCTTTCACAGACAATCTCTTTGCAATGACAGAGAGAGATATAATGTGCAATGGACTGGTAAATGGTATATGGGAGTGGGGTTGGAGACACGGATTTTCTGCAGATGAGACTGAGATGGTTGTAAATAAAGTAGAGAGCTTGCTTGTAAGTGAATTAATTGAGGACATTATTATAAATTTATGA 2403 0.3774 MYKSFVTCDDPKGVVQCGTIRKYRRTYSQKMKDKIKIQKTPENIETSLMNTRYKEGKILKGSSENLTDPSSLHLIQVSRGDQSLNSMIDSWSSNFMYDGRSKDTAKSLLKGVLNMQDSLIMLSKLQEASQHTARSKRKHTEKPKRDKIDAKMIGRMHANQFSEQSNPKRYQRAQPSADDGSSSKLIKESLIRQNLFPFPNTTPISPSQSSGVSTHRFADPSFSLTPSKGPNLVAKLMGLEEVPSKSFPAIMQKPLDGEKIMLKVKRNKYRAEIEKVNPEQKVLRETSDTVHLKGQNFVKEPKLLVHHFSDPNSKQFDNLSPIVLMKPQCTSCQESVKTHIPVPPEELSIRKLREEIISSKTIRQRKGSSSSSTNMDKEMEKDVRRRLTKEKRPEFLKEVVKLDAKGINPMEKTSGKLKLYCQVSHTSQANETIDKKCKVQIISRKLPEKDISVPRIVAIPQDQREITSTKLRKPPNWSRVDKNEIFFLESTDSNTIFISKKESQKITNSKDLSMEIKESDSVLNSLTRRKNQLKNQTPSAEPEAAKSIAEQMGLGKEKKSIGVPGKDDSAEIRITTVQADELMMRREALAYENKNRGCKRRKSSSGNDIMLLKSEHENDSIFVKEAPDSIPDKEGDKLKHFLLTSESFIRHAEKLFNLDVDCPKILQKNETKGIDNLRLYLECANELSECKSLQESQVVRSLLLTCVGNSRLLVSLRRLVEEIYDAIENLKFYSESCGEKPFTDNLFAMTERDIMCNGLVNGIWEWGWRHGFSADETEMVVNKVESLLVSELIEDIIINL 800
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi20g00195 800 MobiDBLite consensus disorder prediction 126 183 - -
Sebi20g00195 800 PANTHER OS01G0228800 PROTEIN-RELATED 1 798 - -
Sebi20g00195 800 MobiDBLite consensus disorder prediction 158 183 - -
Sebi20g00195 800 MobiDBLite consensus disorder prediction 359 385 - -
Sebi20g00195 800 Pfam DUF761-associated sequence motif 228 247 IPR032795 -
Sebi20g00195 800 Coils Coil 516 536 - -
Sebi20g00195 800 MobiDBLite consensus disorder prediction 197 223 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi20g00195 Sebi-Chr20 2063996 2067056 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi20g00195 638 797 TRM (TON1 Recruiting Motif) Superfamily AT3G24630 30.952 1.47e-14 75.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi20g00195 - - var:108346558 762.296