Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi20g00179 ATGAGTGATACCTCTTACTCCAGTAATAGGCAGGAGCAGGACAGCTCCTTCTACAAGATGCCAATCATCAAGTTTACCAAGCTCTTCATCAATGGAGATTTCGTCGATTCCGTATCAGGGAAGACATTTGAGACAATAGACCCAAGAACAGGAGAAGTGACTGCAAGTATTAGCGAGGGAGATAAAGAAGACATTGACATTGCTGTTAAGGCAGCGCGTGAGGCATTTGATTCAGGTCCATGGCCTCGCATGTCCGGTGTTGAAAGGGCAAAAATTATGATGAAATGGGCAGACTTAATTGATCAAAACAGAGAAGAACTAGCAGCATTGGAGACGATTGATTCTGGAAAGTTGTACCATTCCACTATGGTTTTGGAAATTCCTGCAGCCGCAAGTACTCTACGTTACTATGCAGGTGCTGCTGATAAAATTCATGGCGAGGTTTTAAAACCAGCACGGGAGTTTCACGCTTATACACTGTTGGAACCAATTGGTGTTGTGGGACACATAATTCCCTGGAATGCCCCAACCTCCATTTTCTTCACCAAAGTTAGCCCTTCCTTAGCTGTGGGATGCACCATGGCTGGAATCCCAAATGGAGTGCTCAATGTAGTGCCTGGATTTGGACCAACTGCTGGTGCAGCAATAAGCTCACATATGGACATAGATGCGGCAATTGAAGTAGGTCGTGAAGTAATGCAAGCTGCAGCTAGGAGTAATTTAAAACCGGTTTCACTTGAATTAGGAGGCAAATCACCTCTCATTATTTTCGATGATGCTGATATAGACAAAGCTGCTGAACTTGCTCTCTTAGGCATCCTATTTAACAAGGGAGAAGCTTGTGTTGCAAGTTCCCGTGTGTTCGTTCATGAAGGGATCTATGATGAATTTGAGAAGAAGTTGGTGGAGAAGGCAAAAGCTTGGATCGTTGGGGATCCTTTTGATCCTAAAACTCAGCAAGGGCCACAGGCTTACAGGAACCAATTTAAAAAAATTCTTTCCTATATTGAGCATGGAAAGAGAGAAGGAGCCACCCTCTTGACTGGAGGTAAAACAGTGGGCAGTAAAGGCTACTACATTGAACCAACAATTTTCTCCGATGTAAAGGAGGATATGCTTATAGCACAGGATGAAATATTTGGCCCTGTGATGGCACTGATGAAGTTTAAGACTATTGATGAAGCAATAAAGAGTGCTAACAATACCAAATATGGCCTAGCAGCAGGCATTGTGACCAAGAACTTGGATACTGCAAACACTATGTCAAGGTCCATTCGGGCAGGCACTATTTGGATCAATTGCTATTTCGCCTTAGGGAGTGACATTCCTTTTGGAGGCTATAAGATGAGTGGATTTGGAAGAGATTTGGGATTGGAGGCCCTTCACAACTTGCTTTCGGGGGCAGAAATCATGCGCTTCACTAGTAACTCTGGAAATCACCATGCAGTGAACTTCAACACCTCTAGAGGGTTTCTCACCAAACTCAAAATAGGAGTCAAAGAAACGTTTTTCCCTGACGATCTCTTTAGGCATTCCAAAAATAAAGACAAGCCACTACTCAAATGGGTCCAGTATTTCGTCCCAATCTTTGAGTGGCTCCCCACTTACACTTGGCGCATGTTTTACTCTGACTTCCTCGCCGGCCTCACCATCACCAGCCTCGCTGTCCCTCAAAGCATTAGCTTTGCCAAACTCGCCAACCTTCCTCCCATTATTGGCCTATATAGCAGCTTTGTCCCACCTCTTGTGTATGCTATTTTTGGGAGCTCAAGGCACATATCAGTGGGGACGACTGCTTCATTATCAATGCTTATATATCAAAATGTTTCAACCGTTGCAAATCCAGAAGAGGACCTAAACCTCTATATTCATTTGGTTTTCACAACTACCTTTATTGCTGGCGCCTTCCAGGCTTGTTTGGGTATTCTTAGGTTGGGGATATTGGTGGATTTCTTGTCCGGTCCTACCATCACTGGCTTCATCGGAGGGTCAGCAACAATTCTCGGCGTCCAACAACTGAAGGGCATTTTCGGTATCAAATATTTTTTGGGTAAAATGGACCTCATAACACGGTTGAAGGGCTTATGGACCAGAAGACACGAGATGAGGTGGGAGACCATAGTTCCGGGTGTGATCTCCCTTGTGTTCCTGCAGTTTACTAAATACTTGAGGAATAAGAACCCAAAACTCTTTTGGTTATCAGCTTTAGCTCCAATGACAACTGTCATAACTGCTGGTGTCTTGACTTATTACCCCATTGAAGGCCAAAGACGTGGGATTCAAATGGTGGGTCATGTAGACAAAGGAATAAATCCTTTTTCCATCCAGAATTTTAACTTTGACAGTAAATATTTACCTGTGATATTGAAAGCTGGTTTTATCACAGGCGTACTATCACTGGCTGAAGGAATAGCAATAGGAAGAAGCTTTTCTGTTATTAAAAACACACCTCATGATGGGATCAAAGAGATGATAGCTTCTGGTCTTATGAACTTATGTGGTTCTTTTACTTCATGTTACATGACTACCGGAACATTTTCCAAAACGGCTGTGAATTACAGCGCAGGGTGTGAAACAGCCATGTCAAACATAGTTCAGGCGTTACTAATGGCACTCGTACTGAAGTTTTTGACACCATTTATTGGTCACATCCCTCTTTTTGCTCTATCAGCTATTACAGTCTCCGCCGTGATGGGGTTGATTAACTATACCGAAGTTATTTACTTTTATAAAGTTGACAAGTTTGATTTTATTATTTGCATGACGGCCTTTCTTGGTGTAATCTTTATAGCCTCCGATGTTGGCTTCATGTTGTCAGTTGGTCTTAGTGTGCTTAGGGCACTCTTACATGTGGCTAGGCCTGCGGCATGTAAGCTTGGAAAGCTACCTGACTTGGATATATATCGAGATGTTGAGCAGTATACTGTTTCAACATTCCCAGGTGTTCTAATTTTACAACTTGGTTCTCCCATTTACTTTGCAAATTCTTCCTACATCAAAGAAAGAATCATGAGGTATATTCGAAGTGAGCAAGACTCTAATGGACAAATCGTTGAGCAGATCATACTCGATTTGTCAGGAGTGACATCCATTGACACCACGGCTATTGAAGTATTGTTGGAAATAAATAAAATCTTGGAAAGGATTGGAATCAAGAAGAGTTGTCTGCCGTTGGGAATCTATCGTCCGTCGTTTTGGAACCTTGAGGTCGTCGTTGGTCATTGCCATCCGTCGTCCGATGTTCTCGAAGGCTCCGGTAAAAAATCCCTGTCCGCGTGTTATTGTGATGAACGCGATGTTAAGGTGATGGTTGCAACCCGATGTGATAAACATTCATCTTCCTCTTCTCTTTTCTCTGTTGCGTCATGGTGA 3372 0.4303 MSDTSYSSNRQEQDSSFYKMPIIKFTKLFINGDFVDSVSGKTFETIDPRTGEVTASISEGDKEDIDIAVKAAREAFDSGPWPRMSGVERAKIMMKWADLIDQNREELAALETIDSGKLYHSTMVLEIPAAASTLRYYAGAADKIHGEVLKPAREFHAYTLLEPIGVVGHIIPWNAPTSIFFTKVSPSLAVGCTMAGIPNGVLNVVPGFGPTAGAAISSHMDIDAAIEVGREVMQAAARSNLKPVSLELGGKSPLIIFDDADIDKAAELALLGILFNKGEACVASSRVFVHEGIYDEFEKKLVEKAKAWIVGDPFDPKTQQGPQAYRNQFKKILSYIEHGKREGATLLTGGKTVGSKGYYIEPTIFSDVKEDMLIAQDEIFGPVMALMKFKTIDEAIKSANNTKYGLAAGIVTKNLDTANTMSRSIRAGTIWINCYFALGSDIPFGGYKMSGFGRDLGLEALHNLLSGAEIMRFTSNSGNHHAVNFNTSRGFLTKLKIGVKETFFPDDLFRHSKNKDKPLLKWVQYFVPIFEWLPTYTWRMFYSDFLAGLTITSLAVPQSISFAKLANLPPIIGLYSSFVPPLVYAIFGSSRHISVGTTASLSMLIYQNVSTVANPEEDLNLYIHLVFTTTFIAGAFQACLGILRLGILVDFLSGPTITGFIGGSATILGVQQLKGIFGIKYFLGKMDLITRLKGLWTRRHEMRWETIVPGVISLVFLQFTKYLRNKNPKLFWLSALAPMTTVITAGVLTYYPIEGQRRGIQMVGHVDKGINPFSIQNFNFDSKYLPVILKAGFITGVLSLAEGIAIGRSFSVIKNTPHDGIKEMIASGLMNLCGSFTSCYMTTGTFSKTAVNYSAGCETAMSNIVQALLMALVLKFLTPFIGHIPLFALSAITVSAVMGLINYTEVIYFYKVDKFDFIICMTAFLGVIFIASDVGFMLSVGLSVLRALLHVARPAACKLGKLPDLDIYRDVEQYTVSTFPGVLILQLGSPIYFANSSYIKERIMRYIRSEQDSNGQIVEQIILDLSGVTSIDTTAIEVLLEINKILERIGIKKSCLPLGIYRPSFWNLEVVVGHCHPSSDVLEGSGKKSLSACYCDERDVKVMVATRCDKHSSSSSLFSVASW 1123
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi20g00179 1123 FunFam Aldehyde dehydrogenase3 250 439 - -
Sebi20g00179 1123 Pfam STAS domain 975 1052 IPR002645 -
Sebi20g00179 1123 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 195 464 IPR016162 GO:0016491
Sebi20g00179 1123 ProSiteProfiles STAS domain profile. 972 1052 IPR002645 -
Sebi20g00179 1123 SUPERFAMILY SpoIIaa-like 973 1052 IPR036513 -
Sebi20g00179 1123 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 22 194 IPR016162 GO:0016491
Sebi20g00179 1123 CDD STAS_SulP_like_sulfate_transporter 978 1052 - -
Sebi20g00179 1123 PANTHER ALDEHYDE DEHYDROGENASE-RELATED 17 465 - -
Sebi20g00179 1123 ProSitePatterns Aldehyde dehydrogenases cysteine active site. 274 285 IPR016160 GO:0016491
Sebi20g00179 1123 Pfam Aldehyde dehydrogenase family 34 465 IPR015590 GO:0016491
Sebi20g00179 1123 Pfam Sulfate permease family 541 922 IPR011547 GO:0016020
Sebi20g00179 1123 ProSitePatterns Aldehyde dehydrogenases glutamic acid active site. 246 253 IPR029510 GO:0016491
Sebi20g00179 1123 Gene3D STAS domain 953 1055 IPR036513 -
Sebi20g00179 1123 FunFam Aldehyde dehydrogenase, mitochondrial 16 273 - -
Sebi20g00179 1123 SUPERFAMILY ALDH-like 17 465 IPR016161 GO:0016491
Sebi20g00179 1123 ProSitePatterns SLC26A transporters signature. 570 591 IPR018045 GO:0008271|GO:0008272
Sebi20g00179 1123 NCBIfam sulfate permease 528 1053 IPR001902 GO:0016020|GO:0055085
Sebi20g00179 1123 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 250 439 IPR016163 GO:0016620
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi20g00179 Sebi-Chr20 1901622 1916241 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi20g00179 19 477 Aldehyde Dehydrogenase Gene Family AT3G24503 64.198 0.0 636
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi20g00179 K12355 K17471 gmx:100789107 757.288