Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi20g00147 ATGGCTGAATTCACAGCAAGTTTGCAAAGTTTTAGGCCCTCATTTCCTTTCTTAGACATTGATGACATGGAACTGATAAACCAATTCAAAGGGGTGAACCCACATGTCCTTGACAACTCAATTTTGAATATGCAGAACTTGATGCCATTCTCCAGTGACAGCTTCTTGGGCTCTTCAGAACCTGAATTTCCAGGAAAGTTGTTGTTGGAAGAAAATTTCCAAGGCCTTTTGCATTTTGTCAATCACAATGCAGCTCCAGTTTCAGTTCCTATTTCTTCAGCAGAAAATGAAGGTAAAAAGAGGAAAGCAACTGATATGCCTGGACCCAGTTCTGCAAATTCAACTCCTGCAGTTTCTGAGAATGGAAGCAAGAAAAAAGATAGTTCTGGCAGAGGCAAAAGAGTAAAAAGGGATGTAACAGAAGAAGACCAAAAACCAAAGGAAGTGGTTCATGTTAGAGCCAGAAGAGGTCAAGCTACTGATAGTCACAGTTTAGCAGAAAGGGTTAGAAGAGGGAAAATCAATGAAAAACTAAGGTGCTTACAGAACATTGTCCCAGGATGTTACAAGACAATGGGTATGGCGATAATGTTAGATGAGATCATAAACTATGTCCAGTCCTTGCAGCAACAAGTGGAGTTCCTCTCTATGAAGCTCACTGCAGCAAGTACCTTTTATGACTTCAATTCTGAGACAGATGCATTAGAGACAATGCAGAGAGCAGCAAAGGCATCCGAGGCAAAAGAGTTGGGCAAGTATGTGAGAGAAGGATATGAAGGAGTTTCTTGTTTTCAACCAAGTTGGCCATAA 810 0.4099 MAEFTASLQSFRPSFPFLDIDDMELINQFKGVNPHVLDNSILNMQNLMPFSSDSFLGSSEPEFPGKLLLEENFQGLLHFVNHNAAPVSVPISSAENEGKKRKATDMPGPSSANSTPAVSENGSKKKDSSGRGKRVKRDVTEEDQKPKEVVHVRARRGQATDSHSLAERVRRGKINEKLRCLQNIVPGCYKTMGMAIMLDEIINYVQSLQQQVEFLSMKLTAASTFYDFNSETDALETMQRAAKASEAKELGKYVREGYEGVSCFQPSWP 269
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi20g00147 269 MobiDBLite consensus disorder prediction 107 123 - -
Sebi20g00147 269 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 156 226 IPR036638 GO:0046983
Sebi20g00147 269 CDD bHLH_AtBPE_like 148 233 - -
Sebi20g00147 269 Pfam Helix-loop-helix DNA-binding domain 162 209 IPR011598 GO:0046983
Sebi20g00147 269 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 158 208 IPR011598 GO:0046983
Sebi20g00147 269 MobiDBLite consensus disorder prediction 90 164 - -
Sebi20g00147 269 Gene3D - 158 220 IPR036638 GO:0046983
Sebi20g00147 269 PANTHER STEROL REGULATORY ELEMENT-BINDING PROTEIN 93 236 IPR024097 GO:0006355
Sebi20g00147 269 SMART finulus 164 214 IPR011598 GO:0046983
Sebi20g00147 269 FunFam transcription factor BEE 3-like 155 226 - -
Sebi20g00147 269 MobiDBLite consensus disorder prediction 124 164 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi20g00147 Sebi-Chr20 1473560 1474963 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi20g00147 37 268 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G73830 55.159 2.02e-65 203
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Sebi20g00147 HLH 0.00025 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi20g00147 - - aprc:113855800 383.645