Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi20g00134 ATGGCAGCCAAACGGTTTTTCGATGATAATTCTGATCATGACTCTGACAAGCCAAGCGACAAACGGATGAGAACTACTCCTTCAAGACCTTCTTTTGCTTCGGTAATAGGAGAAGTCGTTATGGTGAAAAACATGCAGAACCTTTTCTCAGGCTTGGAGCCTTTGCTTAGAAGAGTGGTGAATGAAGAGGTGGAGAGAGCGATGAGACATTGTATTCCACGGTCAATGTCTAGGTCCTCTTCATTGAGAATCCAAGCATTAGAACAACCATCAAGCTTTCAACTAATGTTCAACAAGAGCCTTTCGCTCCCTATATTCACTGGAAGCAGGATTCTAGACATGGATGGGAACCCAATCCATGTGGTTCTTGTTGACAAAACCGGTTCAGGTGAAGTGGTTCCAACAAGCCTTCCACATCCGATAAAATTAGAGATTGTGGTTCTTGATGGAGATTTCTCTGGTGGTGATAAGGAGACATGGACCAGTGAGGAATTCAACAGTCACATAGTGAAGGAGAGAACGGGAAAAAGGCCATTGCTAACAGGGGAGCTGAATCTGACTATGAGAGATGGAATTGCACCAATTGGAGATATAGAATTCACTGATAATTCAAGCTGGATACGTAGCAGGAAGTTCAGAGTTGCTGTTAGAGTCGCTCCTGGGAGTAATCCAACTCTCCGAATCCGTGAAGGCATGACTGAACCGTTTGTCGTTAAGGATCACCGTGGTGAATTGTACAAGAAGCATCACCCACCAATGCTCAACGACGAAGTGTGGCGCCTAGAGAAGATTGGGAAAGACGGAGCTTTCCACAAGAAATTGTCCAAAGAAAAGATTACCACAGTGCAAGAATTTCTCAAGTTATCCGTTGTTGATCCTCATCGTCTCAGAAAGATTTTAGGCATTGGTATGTCAGAGAGAATGTGGGATGTGACAATCAAGCATGCAAAGACTTGCATCGTGGGCAACAAACTCTACGCCTATCGTGGGCCAAATTTTACTATCTTTCTCAATGCCATATGCCAGTTGGTTAGAGCTGATATCAACGGCCAAAACTTGCCTGCCAGAGAACTGAGCAACATGAACAGGAGCTTTATAGAGAAATTGGTGAGAGAAGCATATGCTAAATGGAATGAATTGGAGGAAATTGATGGGGTTTTGAATGATAACGTTGCTTTGTTAACCCAAGGTGAAACTGTGGAGCAATTTCCAAACAATCACCAAGCATCGCTAATAACATATGATCAGAACAACTATTATGGGGATAAATCCATAGAAGCTGGGAACTATGTACCAAGCCATAATGCACAAATTGGGTATAGCGAGTGGGCAGTGAATGCAACATTTGCCACCACAGGATCACCAGTGAATGGCATGCCTTTCAGCTTCTCAGAGTCACAATCAGACGGTGATATAACGCCCTCAGGTTCAGGTTCAGTCATTCATGGTGCTGCAAGGTGGCATTAA 1467 0.4376 MAAKRFFDDNSDHDSDKPSDKRMRTTPSRPSFASVIGEVVMVKNMQNLFSGLEPLLRRVVNEEVERAMRHCIPRSMSRSSSLRIQALEQPSSFQLMFNKSLSLPIFTGSRILDMDGNPIHVVLVDKTGSGEVVPTSLPHPIKLEIVVLDGDFSGGDKETWTSEEFNSHIVKERTGKRPLLTGELNLTMRDGIAPIGDIEFTDNSSWIRSRKFRVAVRVAPGSNPTLRIREGMTEPFVVKDHRGELYKKHHPPMLNDEVWRLEKIGKDGAFHKKLSKEKITTVQEFLKLSVVDPHRLRKILGIGMSERMWDVTIKHAKTCIVGNKLYAYRGPNFTIFLNAICQLVRADINGQNLPARELSNMNRSFIEKLVREAYAKWNELEEIDGVLNDNVALLTQGETVEQFPNNHQASLITYDQNNYYGDKSIEAGNYVPSHNAQIGYSEWAVNATFATTGSPVNGMPFSFSESQSDGDITPSGSGSVIHGAARWH 488
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi20g00134 488 MobiDBLite consensus disorder prediction 464 488 - -
Sebi20g00134 488 MobiDBLite consensus disorder prediction 1 29 - -
Sebi20g00134 488 Pfam Calmodulin binding protein C-terminal domain 324 383 IPR046829 -
Sebi20g00134 488 PANTHER OS02G0177800 PROTEIN 1 435 IPR012416 GO:0005516
Sebi20g00134 488 Pfam Calmodulin binding protein central domain 253 319 IPR046830 -
Sebi20g00134 488 Pfam Calmodulin binding protein-like N-terminal domain 93 241 IPR046831 -
Sebi20g00134 488 MobiDBLite consensus disorder prediction 1 24 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi20g00134 Sebi-Chr20 1329165 1332292 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi20g00134 3 385 Calmodulin-binding Proteins AT5G57580 50.258 3.65e-123 372
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi20g00134 - - gmx:100802257 745.347