Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi20g00119 ATGGAGAGAGATTTCATGGGTCTGAGCTCAAAAGAACCAGTCTCTGTGGTCAAGGAGGAGGTGAACGATGATGGGTGCAAAGACTCAGGCATGTTTCCTCCTCATCCACTTTTCCCTCTCTGCTTCACAAAGGGTTCTGCTGCACAATGGCCCTTCTCCAACAAAGTCTCTGCTGTTCCACATCTGATGTCTTTCAAGGTTTCTCAAGATGATAAGACTAAAATGTTAGTGTCTGATCCCATGACATCTGCTGGGTTTATGACTGTCTTAAGTCCAGATGCATTTGACTCTAGTCAAAAAAGCTCTGCTGCTGAACCTCAGAAATCTTTCAATCACAATGGGCAAGGTGGCTTTCACTTTTCGCTGACTCCATATCCTGTACAACATGATGTGAAGATGTTTTCAGTTTCCAATCCAGCAATATCAGTTTCCCTGGGGAACCCATTCCTGAAGAATCATTTTGCAACTGCTGGTCAGAATATGAATGGTACTAATGTGACACAGCCGCTTCGTGGGGGAATACCTGTTGCAGCGCCTCATTCATCCCTTCCCACCATTGGTGCTGTTACTGGAATGACTGAATCATGTAACAGCGTGAAACCTTCTGCGCCTTCTGCCCAACTTACCATCTTCTATGCTGGTACTGTCAATGTCTTTGAAGATATCTCTGCTGAGAAGGCACAAGCTATCATGTTGTTGGCTGGCAACTCTAACATGGCACACGCCAAAGCTCAAGCACCTGGCTCTAAGTTGGTAGCTGTTGATGGTGTGTCCGTGAGTCAACCCGCAAATACACCACCCTGCTCAGGTCTTTCAAGTCCTTTATCTGTTTCGTCGCATACTGGTGCACAGTCAGGGAGTGGATCAACTAGCACTGATGAGTTTCTAGCAGCTAAAACAACTGGTGTTCCCACCACTCCTGTTAGCAATGTGGAGCCTCCAAAAATAGTCAATGCAGCTACTATGTTGACATCAGCTGTTCCTCAAGCTCGGAAAGCATCCTTGGCTCGATTTTTAGAAAAGCGCAAGGAAAGGGTGATGAATGCAGCACCATATAACCTCAACAACAAGTCTGAAGAGTGCACCACTGCAGGATAG 1098 0.4617 MERDFMGLSSKEPVSVVKEEVNDDGCKDSGMFPPHPLFPLCFTKGSAAQWPFSNKVSAVPHLMSFKVSQDDKTKMLVSDPMTSAGFMTVLSPDAFDSSQKSSAAEPQKSFNHNGQGGFHFSLTPYPVQHDVKMFSVSNPAISVSLGNPFLKNHFATAGQNMNGTNVTQPLRGGIPVAAPHSSLPTIGAVTGMTESCNSVKPSAPSAQLTIFYAGTVNVFEDISAEKAQAIMLLAGNSNMAHAKAQAPGSKLVAVDGVSVSQPANTPPCSGLSSPLSVSSHTGAQSGSGSTSTDEFLAAKTTGVPTTPVSNVEPPKIVNAATMLTSAVPQARKASLARFLEKRKERVMNAAPYNLNNKSEECTTAG 365
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi20g00119 365 MobiDBLite consensus disorder prediction 262 294 - -
Sebi20g00119 365 SMART tify_2 201 236 IPR010399 -
Sebi20g00119 365 Pfam Jas motif 328 352 IPR018467 -
Sebi20g00119 365 PANTHER PROTEIN TIFY 4A-RELATED-RELATED 132 358 IPR040390 -
Sebi20g00119 365 ProSiteProfiles Tify domain profile. 201 236 IPR010399 -
Sebi20g00119 365 Pfam tify domain 203 235 IPR010399 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi20g00119 Sebi-Chr20 1191405 1195016 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi20g00119 50 358 Tify Gene Family AT3G17860 36.760 1.60e-38 138
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Tify Sebi20g00119 tify 4.5e-17 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi20g00119 K13464 - gmx:100807043 490.345