Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi20g00115 ATGGTTCTGTTTCTTCTCTTCCTTCTCACAATCTCAGCCATAACAACCACATCAACCTCCTCAACCGATTCTTTCATCTTCGGTGGTTGTTCTCAGTTGAAATACTCGCCGGGTTCCGCCTACGAGAACAGTGTCAACTCGCTCCTCACCTCCCTTGTCAACTCAGCCACGTTCACCAACTACAACAACTTCACCATTCAGGCCACCCCTGCCTCCGACACCGTCTACGGCCTCTTCCAGTGCCGCGGAGACCTCAACAACGACCAGTGCTCCCGCTGCGTGGCGCGTGCGGTGAGTCAACTCAACACTCTCTGCTTCGACTCGTACGGTGGCGCGTTGCAGCTCGAGGGATGTTTCGTGAAGTATGATAATGCCACGTTCCTTGGTGTGGAGGACAAGACGGAGGTGATCAAGAAATGTGGACCGTCGATTGGGTTGACTTCCGATGCGTTGACACGAAGGGATGATGTGCTGGCGTATTTACAGACGTCGGATGGGACTTACAAGACTTACAGGGTTAGTGGCTCAGGGGATTATTGGAGTGTGGCGCAGTGCACGGGGGATTTGAGTCCCAGCGAGTGCCAGGATTGCCTTTCTGATGCCATCCAACGGTTGAAAACAGAGTGTGGGGCCTCCACTTGGGGAGACATGTACCTGGCAAAGTGCTACGCGCGATACTCCGAAGGTGGGACTCACTCGCGAGGCAGTAATAACGATGATAGCAATCACAACGATGATGAGATTGAGAAGACACTTGCCATACTAATTGGACTCATTGCTGGGGTTGCTCTAATCATCGTTTTCCTTTCCTTCTTGTCCAAGGTCTGCGAAAAGCAGAAAGGTGGTAAATAA 852 0.52 MVLFLLFLLTISAITTTSTSSTDSFIFGGCSQLKYSPGSAYENSVNSLLTSLVNSATFTNYNNFTIQATPASDTVYGLFQCRGDLNNDQCSRCVARAVSQLNTLCFDSYGGALQLEGCFVKYDNATFLGVEDKTEVIKKCGPSIGLTSDALTRRDDVLAYLQTSDGTYKTYRVSGSGDYWSVAQCTGDLSPSECQDCLSDAIQRLKTECGASTWGDMYLAKCYARYSEGGTHSRGSNNDDSNHNDDEIEKTLAILIGLIAGVALIIVFLSFLSKVCEKQKGGK 283
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi20g00115 283 ProSiteProfiles Gnk2-homologous domain profile. 132 231 IPR002902 -
Sebi20g00115 283 ProSiteProfiles Gnk2-homologous domain profile. 23 127 IPR002902 -
Sebi20g00115 283 FunFam cysteine-rich repeat secretory protein 3 22 127 - -
Sebi20g00115 283 FunFam Cysteine-rich repeat secretory protein 60 148 229 - -
Sebi20g00115 283 Pfam Salt stress response/antifungal 30 124 IPR002902 -
Sebi20g00115 283 Pfam Salt stress response/antifungal 167 227 IPR002902 -
Sebi20g00115 283 Gene3D - 149 229 IPR038408 -
Sebi20g00115 283 Gene3D - 21 127 IPR038408 -
Sebi20g00115 283 PANTHER ANTIFUNGAL PROTEIN GINKBILOBIN-2-LIKE 3 276 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi20g00115 Sebi-Chr20 1155713 1158086 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi20g00115 3 226 Pollen Coat Proteome AT4G20670 24.793 3.86e-15 72.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi20g00115 - - cam:101497633 437.573