Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi20g00073 ATGGATGCTGACACTAAAGTCAGAAGGAAAGAGGTTCTGGGTAGCCTCTGTGATCAAAGGGCTAGAATGCTGCAAGACCAATTCAGTGTTAGTGTCAACCATGTCCATGCCCTTGCATCCTTGTTTCAACTTTCCATTACTACAGAAAACCCTTCTGCCATTGACCAGGAAACCTTTGCTGAATATACAGCCAGGACAGCATTTGAACGGCCATTATTGAGTGGGGTGGCCTATGCACAAAGAGTGGTTAACTCAGAGAGAGAAAAATTTGAGAAGCAACATGGATGGGTTTATAAAGACAATGGAAAAGAGAGCCTTCCCAGATTGTTGGGTTCTCATCATCTTGGTGTGGTTTTAACATTTCCTGTTTACAAATCTAAGCTCCCTCCAAAGCCAACAACAGAAGAGCGCATTAAAGCAACAGCAGGATATGTTGGAGGATCCTTTGATGTGGAGTCCCTTGTGGAGAATTTACTTGGTCAACTTGCTGGTAACCAAGCAATATTGGTGAAAGTATATGATGTCACGAACTCTACTGACCCCCTAATCATGTATGGCAACCAATATGAAGAAGGCGATATGTCTCTGCTCCATGAAATTGGTTACATTTTATATGGTGCTGGAAATCATATTGTCAAAGTAGAGGATGATTTCCATGAAATGCAGGAATTAAAAGTCCGAGCAGAAAGCAGCTGA 696 0.4224 MDADTKVRRKEVLGSLCDQRARMLQDQFSVSVNHVHALASLFQLSITTENPSAIDQETFAEYTARTAFERPLLSGVAYAQRVVNSEREKFEKQHGWVYKDNGKESLPRLLGSHHLGVVLTFPVYKSKLPPKPTTEERIKATAGYVGGSFDVESLVENLLGQLAGNQAILVKVYDVTNSTDPLIMYGNQYEEGDMSLLHEIGYILYGAGNHIVKVEDDFHEMQELKVRAESS 231
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi20g00073 231 Gene3D CHASE domain 107 206 IPR042240 -
Sebi20g00073 231 Gene3D CHASE domain 54 106 IPR042240 -
Sebi20g00073 231 SMART CHASE_2 50 187 IPR006189 -
Sebi20g00073 231 ProSiteProfiles CHASE domain profile. 50 96 IPR006189 -
Sebi20g00073 231 Gene3D - 1 53 - -
Sebi20g00073 231 ProSiteProfiles CHASE domain profile. 111 187 IPR006189 -
Sebi20g00073 231 Pfam CHASE domain 111 185 IPR006189 -
Sebi20g00073 231 Pfam CHASE domain 53 96 IPR006189 -
Sebi20g00073 231 Coils Coil 218 231 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi20g00073 Sebi-Chr20 714362 716426 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi20g00073 1 231 Histidine Kinase Gene Family AT2G01830 56.386 1.19e-105 326
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi20g00073 K14489 - gmx:100818481 352.443