Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi20g00033 ATGTCTAATCAATCAGAAGATGCACAAGGGTCTACTACTCCATCAAAGAGCAACAAGTCCAATGATGGTTCGTCTTCATCCCCTACTGCTAAGAAGCTTTCCAACTGGTTGCATTCAGTTTCTAATAGGCAGAGTCCTAGTCCTCCATCTCCCAACCTGACAAGAGGAGAAAGAGTGGAGCCATCTGATACAGTGAGCAGTGGTGATTTAGATATTGTTTCTGAGTCAGTGAGGCGTGATTCAGGGTCTAGCACTTCGAGGGATCCTGAAGTGGAAGAAGAATATCAGATACAACTGGCTTTAGAGCTGAGTGCAAAGGAGGATCCTGAGGCTGTACAGATTGAAGCTGTTAAGCAGATCAGTTTGGGATCTTGTGACCCTGATAATACACCAGCTGAAGTTGTGGCCTACCGGTACTGGAATTACAATGCTCTTGGTTATGATGACAAGATCTCAGATGGTTTCTATGATCTGGCTGCTGATTCCAATTTGTTGAAACTTGAGCAAAAAGCCCTGGAGCTGGTGGTCAATTCAAGAAAAGATTTTGAAATAGTTATAGATAGTAATTTGGTGCGCAAGCTTGCAATAATAGTGGCTGACTATATGGGTGGATCAGTTGAAGATCCTGAAAGCATGTCAAGAGCATGGAGGAGTCTTAGTTACAGTCTAAAAGCAACCCTCGGTAGCATGGTTTTGCCACTTGGTTCACTGACCATTGGATTGGCTCGGCATCGTGCATTGTTATTTAAGGTTTTAGCTGATGATTTGGGCATCCCATGTCGACTGGTGAAGGGACTGCAGTATACAGGTTCTGATGATGTAGCGATGAACTTTGTCAAGATTGATGATGGAAGGGAGTACATTGTTGATCTCATGGCTGCTCCTGGAACACTTATTCCATCTGATGCAACTGGATCTCATATCGAGTATGATGAATCTTCTTTTGTAGCCACTCCTTCATCAAGAGACCTTGATTCGTCTCATATTGCATCATTCAGCAGTGGGGTGGGAAGTTCATCTGAAGAAACTTCAGACTTTGGGACTCTTGAGAGAGGAAACAGGTCAAAACATTTTGTGTATTCAGGGAAAGAATCTGATGGAAATGTACAGCAGGAAACTAAGGTTGCAGATAATCTAGGTCCTCGATTTTTGCCTCCATTACCTCACCTCAGAGTTCATCCCAAAGCAAGTCCTAGCAGTCAGCTGGAGCATCCAAAGCCTGTAGAAGGTTTAGGAACCAGCCTTCCTCTTGATACAAGGGAAGCTTCTGAACAGCACATGTCATCCCAGGCTGAAGCAACTCAATATGAGCAGGGCAGCCGAAGTGATGGAGATACAGAGAGTACTGGTTATGAGCCGAAGGGTAGTGATGATGTTGCCGAGTATGACATTCCATGGGAGGAAATCAAGATGGGTGAGCGTATCGGACTTGAACTTAATTACAACTGTGTGGTCTATGTTTGGCGTGCAGGATCATATGGTGAAGTGTACCGTGGTGATTGGCATGGAACTGAGGTTGCTGTAAAGAGGTTTCTAGATCAAGATATCTCTGGTGAATCACTTGAAGAATTCAAAAGTGAGGTCCAAATAATGAAAAGATTGAGGCATCCAAACGTTGTTCTCTTCATGGGAGCTGTAACTCGACCTCCAAATCTTTCAATTGTTACTGAATTTCTTCCTAGAGGGAGTTTGTATAGATTAATTCACCGACCTAACAATCAATTAGATGAGCGAAGGCGGTTGAGGATGGCCCTGGATGCTGTATGTGATTTTGGCTTATCACGAATGAAGAATAGTACTTTCCTTTCTTCCAGATCAACTGCAGGAACAGCTGAGTGGATGGCTCCAGAAGTGTTGAGAAATGAACTTTCAGATGAAAAGTGTGACGTTTATAGCTATGGTGTCATATTATGGGAACTCTGTACTTTACAGCAACCCTGGGGAGGAATGAATCCAATGCAAGTTGTTGGTGCTGTGGGTTTCCAACATCGTCGTCTTGACATTCCAGATGATATGGACCCTGCCATTGCAGATATTATCAGACAATGTTGGCAGACAGACCCAAAGCTGAGACCCACTTTTGCTGAGATCATGGCCGCTCTGAAGCCATTACAGAAGCCAATTACTGGTTCTCAAGTGCATAGACCAAGTGCTCAGCCATCACGAGTTGTTGAAGATCCTGCAGGATAG 2190 0.4402 MSNQSEDAQGSTTPSKSNKSNDGSSSSPTAKKLSNWLHSVSNRQSPSPPSPNLTRGERVEPSDTVSSGDLDIVSESVRRDSGSSTSRDPEVEEEYQIQLALELSAKEDPEAVQIEAVKQISLGSCDPDNTPAEVVAYRYWNYNALGYDDKISDGFYDLAADSNLLKLEQKALELVVNSRKDFEIVIDSNLVRKLAIIVADYMGGSVEDPESMSRAWRSLSYSLKATLGSMVLPLGSLTIGLARHRALLFKVLADDLGIPCRLVKGLQYTGSDDVAMNFVKIDDGREYIVDLMAAPGTLIPSDATGSHIEYDESSFVATPSSRDLDSSHIASFSSGVGSSSEETSDFGTLERGNRSKHFVYSGKESDGNVQQETKVADNLGPRFLPPLPHLRVHPKASPSSQLEHPKPVEGLGTSLPLDTREASEQHMSSQAEATQYEQGSRSDGDTESTGYEPKGSDDVAEYDIPWEEIKMGERIGLELNYNCVVYVWRAGSYGEVYRGDWHGTEVAVKRFLDQDISGESLEEFKSEVQIMKRLRHPNVVLFMGAVTRPPNLSIVTEFLPRGSLYRLIHRPNNQLDERRRLRMALDAVCDFGLSRMKNSTFLSSRSTAGTAEWMAPEVLRNELSDEKCDVYSYGVILWELCTLQQPWGGMNPMQVVGAVGFQHRRLDIPDDMDPAIADIIRQCWQTDPKLRPTFAEIMAALKPLQKPITGSQVHRPSAQPSRVVEDPAG 729
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi20g00033 729 MobiDBLite consensus disorder prediction 331 350 - -
Sebi20g00033 729 ProSiteProfiles Protein kinase domain profile. 482 705 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi20g00033 729 MobiDBLite consensus disorder prediction 1 93 - -
Sebi20g00033 729 Pfam Protein tyrosine and serine/threonine kinase 588 701 IPR001245 GO:0004672|GO:0006468
Sebi20g00033 729 Pfam Protein tyrosine and serine/threonine kinase 490 586 IPR001245 GO:0004672|GO:0006468
Sebi20g00033 729 MobiDBLite consensus disorder prediction 331 346 - -
Sebi20g00033 729 SUPERFAMILY Protein kinase-like (PK-like) 490 700 IPR011009 -
Sebi20g00033 729 FunFam Serine/threonine-protein kinase isoform 1 460 560 - -
Sebi20g00033 729 MobiDBLite consensus disorder prediction 378 458 - -
Sebi20g00033 729 CDD STKc_MAP3K-like 491 701 - -
Sebi20g00033 729 Gene3D Transferase(Phosphotransferase) domain 1 586 712 - -
Sebi20g00033 729 Pfam Ethylene-responsive protein kinase Le-CTR1 157 299 - -
Sebi20g00033 729 MobiDBLite consensus disorder prediction 418 446 - -
Sebi20g00033 729 MobiDBLite consensus disorder prediction 1 71 - -
Sebi20g00033 729 Gene3D Phosphorylase Kinase; domain 1 462 559 - -
Sebi20g00033 729 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 58 706 - -
Sebi20g00033 729 MobiDBLite consensus disorder prediction 73 93 - -
Sebi20g00033 729 MobiDBLite consensus disorder prediction 708 729 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi20g00033 Sebi-Chr20 322127 331881 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi20g00033 435 716 MAP Kinase Kinase Kinase AT1G73660 65.889 9.65e-146 450
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL_CTR1-DRK-2 Sebi20g00033 EDR1 9e-51 CL0125
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi20g00033 - K04424 vvo:131594415 819.305