Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi20g00014 ATGTCTTTTCTCTTAGATGATTGCAAGGAGCACTTGCTGCAGGTGGATGGCTACGCTAATGGACACGACCACTCCAAACCCAAATTCCAGATAAGAAATCTCACCAAACTCTCCGACGATGGCCTTCCCATTCTCAAAGGCATCAACGTTGACATCCCAAAGGGTGTCATCGTTGGGATCATAGGCCCCAGTGGCAGCGGCAAATCAACGCTCTTGAGGTCCCTCAACCGTCTCTGGGAGCCACCCTCCGCCTCCGTCTTCCTTGACGGCGTTGACATCTGCGATCTCGACGTTCTCTCCCTCCGCCGTAAGGTTGGGATGCTCTTTCAGCTCCCTGCCCTCTTTGAAGGCACAATTGCAGACAATGTGAGGTATGGCCCACAACTAAGAGGTAAAAAGCTAACCGATGATGAGGTTCGCAAGTTGCTGGTATTGGCGGACTTAGATGCTTCTTTCATGGATAAGTCCGGTGCTGAGCTCTCTGGGGTTTTGCTGCTGGATGAGCCAACTAGTGCGTTAGATCCAATATCCACAGAAAACATAGAGGATGCCCTGATGAAGCTGAACAAGAATCGGGGCATGACAATGATCATGGTCTCTCATAGCATCAAACAAATCCAGAGGATAGCTGATGTAGTGTGCCTGCTTGTTGATGGTGAAATTGTTGAAGTTCTGAAGCCTGATGAACTCTCTGAAGCCAAGCATCCCATGGCGCAGAGGTTTCTTGAACTCAGTTCTTAG 741 0.4966 MSFLLDDCKEHLLQVDGYANGHDHSKPKFQIRNLTKLSDDGLPILKGINVDIPKGVIVGIIGPSGSGKSTLLRSLNRLWEPPSASVFLDGVDICDLDVLSLRRKVGMLFQLPALFEGTIADNVRYGPQLRGKKLTDDEVRKLLVLADLDASFMDKSGAELSGVLLLDEPTSALDPISTENIEDALMKLNKNRGMTMIMVSHSIKQIQRIADVVCLLVDGEIVEVLKPDELSEAKHPMAQRFLELSS 246
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi20g00014 246 SMART AAA_5 54 220 IPR003593 GO:0016887
Sebi20g00014 246 Pfam ABC transporter 45 162 IPR003439 GO:0005524
Sebi20g00014 246 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 28 233 IPR027417 -
Sebi20g00014 246 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 29 243 IPR003439 GO:0005524
Sebi20g00014 246 Gene3D - 26 245 IPR027417 -
Sebi20g00014 246 PANTHER ABC TRANSPORTER I FAMILY MEMBER 17 6 162 IPR005670 GO:0005315|GO:0016020|GO:0035435
Sebi20g00014 246 CDD ABC_PstB_phosphate_transporter 29 230 IPR005670 GO:0005315|GO:0016020|GO:0035435
Sebi20g00014 246 FunFam ABC transporter, ATP-binding protein 26 241 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi20g00014 Sebi-Chr20 174148 175503 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi20g00014 42 230 Calmodulin-binding Proteins AT2G36910 30.660 1.36e-21 91.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi20g00014 K02068 - gmx:100791365 363.999