Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi209g00056 ATGCGAAATTGGGGGAAATGGGTGTCTGAAATTCGTGAACCAAGGAAGAAATCACGCATATGGTTAGGCACATTCCCTACACCAGAAATGGCAGCAAGAGCACATGATGTAGCTGCTCTTAGCATCAAGGGCAATTCCGCCATTCTCAATTTCCCTGACTTAGTCAACTCTCTCCCACGCCCTGCTTCACTCGCTCCTCGTGATGTTCAAGCCGCTGCAGCAAAAGCTGCTCACATGGAATTCCCTTCTTCAACTTCAACAACATTCTCTTCATCGTCCTTGTTCTCTGCTTCAGATGAATTGAGCGAAATAACAGAGCTTCCTCGGTTGAAAAATAGTGATGAGTGTGGAGAGTTGGATAAGGAGTTTGTGTTGATGGATTCTATTGATGCTTGGAATTGGATGTATCAGCCTCCATGGTTGCAGAACATGGAAGATGTTCTTTGCATAACTAGTTTTCAATTTTCACATCAAGAGTAA 480 0.4396 MRNWGKWVSEIREPRKKSRIWLGTFPTPEMAARAHDVAALSIKGNSAILNFPDLVNSLPRPASLAPRDVQAAAAKAAHMEFPSSTSTTFSSSSLFSASDELSEITELPRLKNSDECGELDKEFVLMDSIDAWNWMYQPPWLQNMEDVLCITSFQFSHQE 159
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi209g00056 159 FunFam Ethylene-responsive transcription factor 2 1 53 - -
Sebi209g00056 159 SMART rav1_2 1 58 IPR001471 GO:0003700|GO:0006355
Sebi209g00056 159 Pfam AP2 domain 3 44 IPR001471 GO:0003700|GO:0006355
Sebi209g00056 159 ProSiteProfiles AP2/ERF domain profile. 1 52 IPR001471 GO:0003700|GO:0006355
Sebi209g00056 159 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF042-RELATED 1 117 - -
Sebi209g00056 159 SUPERFAMILY DNA-binding domain 2 53 IPR016177 GO:0003677
Sebi209g00056 159 CDD AP2 1 54 IPR001471 GO:0003700|GO:0006355
Sebi209g00056 159 Gene3D AP2/ERF domain 1 53 IPR036955 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi209g00056 Sebi-Chr209 1276548 1277027 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi209g00056 1 146 AP2-EREBP Transcription Factor Family AT5G11590 60.000 1.34e-54 170
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Sebi209g00056 AP2 9.9e-11 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi209g00056 K09286 - gmx:100813069 202.216