Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi209g00037 ATGGAGATGGGCAAAGCATGCCGGCTTGGGATCCGAGGAATTAAATCCAAGGCAGATAGAAAACTGATTTTCTGTCAAGAAAATAAACTGCAGGAAGACATGGCTAAAGAAACTCCAACAACAACGTTTTCTTCAAAGTCTCTCATTTTTATCATGTGTCTCTGCTTCTTGTTCATGCTCAACTTCCACTCATCCCATGGAGAAGAACATGAGCTCCTGTTATCCTTCAAAGCTTCCATCCACAACGACCCACTTCACACACTCTCCAACTGGGTCAGTTCCTCTGCCACTCTCTGCAAGTGGCATGGCATCACCTGTGACAACTCTTCCCACATTAACGCCGTGGTGCTCTCAGGGAAAAACATCTCTGGCGAGGTTTCTTCCACCATTTTTCAACTGCCACACGTTACAAGCCTTGACCTTTCCAACAATCAGCTTGTTGGGGAAATCTCTCTCATCAACGCTCCTTCTCTCTCCCCACTGCGTTACCTCAATCTCAGCAACAACAACCTCACGGGTTCTCTGCCTCAATCCTTGTTTTCCGCGTCGTTTTTCAACCTCGAAACTCTGGATCTCTCCAACAACATGTTTTCAGGGAAGATACCAGACCAAATTGGATTTCTCTCCAGCCTAAGGTACCTTGATCTTGGAGGAAACGTTTTGGTGGGGAAGATTCCAAATTCCATCATCAACATGACCACCTTACAGTACCTGACTTTAGCTTCAAATCAATTAGTGGGTGAAATCCCTGCAGAGATAGGCCTAATGAAAAGCTTGGAGTGGATTTATTTGGGTTACAACAACCTTTCAGGTGAGATACCAAGTAGCATTGGGGAGTTATTTTCTTTGAACCACCTTGATCTTGTTTACAACAACCTCACTGGAAAAATTCCTGAATCTCTTGGAAACCTCACTGGTCTTCAATATCTCTTCCTCTACCAGAACAAGCTCACAGGTCAAATTCCTCCATCCATTTTCGAATTGAGAAAGCTCATTTCTCTTGATCTCAGTGATAACTCTCTTTCTGGTGAGATTTCCGAGCTTGTGGTCAATCTCCAGAGGCTGGAGATTCTTCACCTTTTCTCAAACAACTTCACCGGGAAGATACCAAAAGCTCTATCATCTCTGCCTCGCCTTCAGGTTCTTCAGCTCTGGTCAAACAGATTAACTGGTGAGATTCCAGAGGAGCTAGGAAAGCATAGCAACCTCACTGTTTTGGACCTCTCTTCCAACAATCTCACAGGGAATATTCCAAATAGCTTATGTGCCTCTGGAAATCTCTACAAGCTCATCCTCTTCTCCAACTCTTTCAAAGGAAAAATCCCAAATAGCTTAAGCTCTTGCAGAAGCTTAGGCAGAGTGCGCCTCCAAAACAACAAGCTCTCTGGTGAATTACCACCGGAAATGGCCAAACTGCCACAGATATACTTCTTGGATATCTCTGGTAACGAACTTTCTGGAAGGATCGATGATAGAGAGTGGAACATGCCGGCGCTTCAAATGCTCAGTTTGGCTAATAACAACTTCTCAGGGAAGCTACCAGACTCTTTTGGTAGTAACAAACTAGAGGATTTGGATGTATCACAGAATCAATTCTCAGGGTATATTCCAATCGGTTTCAAAACGTTATCAGAACTCGTGCAATTGAAGCTAAGCAATAACAACCTCTTCGGGAACATTCCAGAAGAACTCTGTGAATGCAAGAAGCTTGTTGTTCTAGACCTAAGTCAGAATCAACTCACCGGTCAGATTCCGGTCAACCTCGCCGGCATGCCGGTGCTCGGAATGCTTGACCTATCGGAAAATGAATTATCCGGTGAGATTCCAAAGAATTTAGGAAGTGTGGAATCTCTTGTTCAGGTGAACATTTCACACAACAGATTTCATGGAAGTTTACCTTCTACTGGAGCTTTCCTTGCCATCAATGCCAGTGCGGTTACCGGTAACAGCCTCTGTGACCGTGACGGTGACGTTTCAAGCGGTTTGCCACCGTGCAAAAGCGATCAGAGTCCAACTTGGTTGTTCGTTTTGCTGTGTTTTCTACTCGGATTGGTTGCGTTTGCTGCAGCTGCTGTTCTCGTCGTTTACGTTAAACGACGAAGGAGTAATTTGGAGATGCGAAGAGTGGAAAACGAAGACGGCACTTGGGAGATGCAGTTTTTCGATTCCAAGGCATCGAAAGTGATAAGCATAGACGACGTTTTGTCGTCGGTTAAAGAAGGGAAAGTGATTTCGAAAGGAAGGAACTGGGTTTCATACGAAGGGAAGTGCATGCGAAACGACATGCAGTTTATGGTGAAAGAAATGGGCGATCCGAATTCTCTTCCGCTGAGTTTTTGGGACGATATGGTGAAGTTTGGGAAGCTAATTCGTCACCCGAATATCGTTAAACTTGTTGGAATATGTAGGTGTGGTAAGAGAGGGTACTTGGTGTACGAGAATGAAGAGGGAAACAATTTAACCCAAATACTCAACGGTTTGAGTTGGCAACGGCGACGGAAAATTGCCGTGGGGATTGCAAAAGCACTCAAGTTCTTGCATTGTAACGGTTCATGGATCGGTTTGGTTAATGAGGTGTCACCGGAGATAGTTTTGGTCGACGGCAAAGGCGTCCCTCGCCTGAAGCTCAACCCTCCCGGAATGGCATGTTTGGATGTCAAGTCACCCTACATTGCCCCAGAGGCAAGGATGAGGAAAGATGTGACAGAGAAGAGTGAGATATATGGATTGGGAGTTATGCTGATTGAGTTGTTGACGGGAAGAAGCCCGATGGATACAGAAGGCATGCAGAATAGCATTGTGGAGTGGGCCCGTTACTGTTACTCAGACTGTCATCTTGACACGTGGATAGACCCTGTGATGAAGGGTGGAGATGCAAATGCAGTGGGATATCAGAACGACATCGTTGAGATGATGAATCTTGCACTGCACTGTACCGCTACTGATCCCACCGCAAGGCCATGCGCGAGAGACGTACTCAAAGCCCTAGAGACTGTTCACAGTACCAACACTTTTTGTTGA 3021 0.4542 MEMGKACRLGIRGIKSKADRKLIFCQENKLQEDMAKETPTTTFSSKSLIFIMCLCFLFMLNFHSSHGEEHELLLSFKASIHNDPLHTLSNWVSSSATLCKWHGITCDNSSHINAVVLSGKNISGEVSSTIFQLPHVTSLDLSNNQLVGEISLINAPSLSPLRYLNLSNNNLTGSLPQSLFSASFFNLETLDLSNNMFSGKIPDQIGFLSSLRYLDLGGNVLVGKIPNSIINMTTLQYLTLASNQLVGEIPAEIGLMKSLEWIYLGYNNLSGEIPSSIGELFSLNHLDLVYNNLTGKIPESLGNLTGLQYLFLYQNKLTGQIPPSIFELRKLISLDLSDNSLSGEISELVVNLQRLEILHLFSNNFTGKIPKALSSLPRLQVLQLWSNRLTGEIPEELGKHSNLTVLDLSSNNLTGNIPNSLCASGNLYKLILFSNSFKGKIPNSLSSCRSLGRVRLQNNKLSGELPPEMAKLPQIYFLDISGNELSGRIDDREWNMPALQMLSLANNNFSGKLPDSFGSNKLEDLDVSQNQFSGYIPIGFKTLSELVQLKLSNNNLFGNIPEELCECKKLVVLDLSQNQLTGQIPVNLAGMPVLGMLDLSENELSGEIPKNLGSVESLVQVNISHNRFHGSLPSTGAFLAINASAVTGNSLCDRDGDVSSGLPPCKSDQSPTWLFVLLCFLLGLVAFAAAAVLVVYVKRRRSNLEMRRVENEDGTWEMQFFDSKASKVISIDDVLSSVKEGKVISKGRNWVSYEGKCMRNDMQFMVKEMGDPNSLPLSFWDDMVKFGKLIRHPNIVKLVGICRCGKRGYLVYENEEGNNLTQILNGLSWQRRRKIAVGIAKALKFLHCNGSWIGLVNEVSPEIVLVDGKGVPRLKLNPPGMACLDVKSPYIAPEARMRKDVTEKSEIYGLGVMLIELLTGRSPMDTEGMQNSIVEWARYCYSDCHLDTWIDPVMKGGDANAVGYQNDIVEMMNLALHCTATDPTARPCARDVLKALETVHSTNTFC 1006
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi209g00037 1006 SUPERFAMILY RNI-like 322 633 - -
Sebi209g00037 1006 FunFam Probably inactive leucine-rich repeat receptor-like protein kinase 183 274 - -
Sebi209g00037 1006 SUPERFAMILY Protein kinase-like (PK-like) 737 1000 IPR011009 -
Sebi209g00037 1006 SUPERFAMILY L domain-like 70 418 - -
Sebi209g00037 1006 ProSiteProfiles Protein kinase domain profile. 738 1003 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi209g00037 1006 FunFam Leucine-rich repeat receptor protein kinase EMS1 275 361 - -
Sebi209g00037 1006 FunFam Probably inactive leucine-rich repeat receptor-like protein kinase 362 661 - -
Sebi209g00037 1006 Gene3D Ribonuclease Inhibitor 328 657 IPR032675 -
Sebi209g00037 1006 Pfam Leucine rich repeat 377 436 IPR001611 GO:0005515
Sebi209g00037 1006 Pfam Leucine rich repeat 161 221 IPR001611 GO:0005515
Sebi209g00037 1006 Pfam Leucine rich repeat 521 580 IPR001611 GO:0005515
Sebi209g00037 1006 Pfam Leucine rich repeat 282 341 IPR001611 GO:0005515
Sebi209g00037 1006 Pfam Protein kinase domain 785 994 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi209g00037 1006 ProSiteProfiles Leucine-rich repeat profile. 160 182 IPR001611 GO:0005515
Sebi209g00037 1006 Gene3D Transferase(Phosphotransferase) domain 1 816 1005 - -
Sebi209g00037 1006 Gene3D Phosphorylase Kinase; domain 1 701 813 - -
Sebi209g00037 1006 Pfam Leucine Rich repeat 133 146 IPR001611 GO:0005515
Sebi209g00037 1006 SMART LRR_typ_2 591 615 IPR003591 -
Sebi209g00037 1006 SMART LRR_typ_2 133 156 IPR003591 -
Sebi209g00037 1006 SMART LRR_typ_2 401 424 IPR003591 -
Sebi209g00037 1006 SMART LRR_typ_2 256 280 IPR003591 -
Sebi209g00037 1006 SMART LRR_typ_2 304 328 IPR003591 -
Sebi209g00037 1006 SMART LRR_typ_2 543 567 IPR003591 -
Sebi209g00037 1006 SMART LRR_typ_2 376 400 IPR003591 -
Sebi209g00037 1006 SMART LRR_typ_2 496 519 IPR003591 -
Sebi209g00037 1006 SMART LRR_typ_2 208 232 IPR003591 -
Sebi209g00037 1006 SMART LRR_typ_2 158 182 IPR003591 -
Sebi209g00037 1006 ProSiteProfiles Leucine-rich repeat profile. 402 424 IPR001611 GO:0005515
Sebi209g00037 1006 FunFam Probably inactive leucine-rich repeat receptor-like protein kinase 702 814 - -
Sebi209g00037 1006 Gene3D Ribonuclease Inhibitor 66 225 IPR032675 -
Sebi209g00037 1006 Gene3D Ribonuclease Inhibitor 226 324 IPR032675 -
Sebi209g00037 1006 PANTHER UNNAMED PRODUCT 210 925 - -
Sebi209g00037 1006 Pfam Leucine rich repeat N-terminal domain 68 107 IPR013210 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi209g00037 Sebi-Chr209 838313 844474 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi209g00037 40 997 Receptor kinase-like Gene Family AT2G25790 52.626 0.0 929
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_Singleton Sebi209g00037 Pkinase 4.6e-15 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi209g00037 - - gmx:100777118 1438.71