Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi209g00014 ATGGCCATCGCAACAGAGACTCAGCCTCAACCTCAACAACACACGGCTTATTCGGAGGTTTCAGGTTCAGCTGCGGAGCAAAGAAGGTGGACGCTTAATGATTTTGATATCGGAAAACCTCTTGGAAGGGGAAAATTCGGTCATGTCTATTTGGCCAGAGAAAAGAGAAGTAATCACATCGTTGCTCTGAAAGTACTCTTTAAGAGCCAATTGCAACAATCCCAAGTTGAGCATCAGCTTAGGCGAGAAGTTGAAATACAAAGTCATCTCCGACATCCCCATATCTTACGCCTTTATGGGTACTTTTATGATCAGAAACGAGTTTATTTGATTTTAGAGTATGCACCCAAAGGTGAACTCTACAAGGAATTACAGAAATGCAAATATTTCAGTGAAAGACGTGCAGCTACTTATGTTGCATCATTGGCCCGAGCTCTTATATATTGCCATGGAAAGCATGTAATACATAGGGACATTAAACCGGAGAACCTTCTTATTGGTGCCCAGGGTGAACTGAAGATAGCTGACTTTGGGTGGTCGGTGCACACATTCAATCGCAGGCGGACCATGTGTGGTACACTGGATTACCTTCCTCCTGAGATGGTGGAGAGTGTAGAACATGATGCGAGTGTGGATATATGGAGCCTTGGTGTCCTTTGCTATGAATTTCTTTATGGAGTCCCTCCTTTTGAGGCTAAAGAACATTCTGATACTTACAGGAGGATAGTACAAGTGGATCTCAAGTTCCCTCCTAAACCAATTGTGTCTTCTGCTGCAAAGGACCTCATCAGTCAGATGCTGGTTAAGGATTCCTCTCAACGTCTACCGTTGCACAAGCTACTTGAACACCCTTGGATTGTTCAGAATGCGGAGCCATCCGGTGTATATAGGGGCTAG 897 0.4437 MAIATETQPQPQQHTAYSEVSGSAAEQRRWTLNDFDIGKPLGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQSQVEHQLRREVEIQSHLRHPHILRLYGYFYDQKRVYLILEYAPKGELYKELQKCKYFSERRAATYVASLARALIYCHGKHVIHRDIKPENLLIGAQGELKIADFGWSVHTFNRRRTMCGTLDYLPPEMVESVEHDASVDIWSLGVLCYEFLYGVPPFEAKEHSDTYRRIVQVDLKFPPKPIVSSAAKDLISQMLVKDSSQRLPLHKLLEHPWIVQNAEPSGVYRG 298
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi209g00014 298 CDD STKc_Aurora 34 287 - -
Sebi209g00014 298 FunFam Aurora kinase A 27 118 - -
Sebi209g00014 298 Pfam Protein kinase domain 37 286 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi209g00014 298 SUPERFAMILY Protein kinase-like (PK-like) 22 290 IPR011009 -
Sebi209g00014 298 ProSitePatterns Protein kinases ATP-binding region signature. 41 64 IPR017441 GO:0005524
Sebi209g00014 298 SMART serkin_6 35 286 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi209g00014 298 ProSiteProfiles Protein kinase domain profile. 35 286 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi209g00014 298 ProSitePatterns Serine/Threonine protein kinases active-site signature. 154 166 IPR008271 GO:0004672|GO:0006468
Sebi209g00014 298 PANTHER SERINE/THREONINE-PROTEIN KINASE IAL-RELATED 9 297 IPR030616 GO:0004672
Sebi209g00014 298 PIRSF ILK 4 283 - -
Sebi209g00014 298 Gene3D Transferase(Phosphotransferase) domain 1 119 294 - -
Sebi209g00014 298 Gene3D Phosphorylase Kinase; domain 1 22 118 - -
Sebi209g00014 298 MobiDBLite consensus disorder prediction 1 22 - -
Sebi209g00014 298 FunFam serine/threonine-protein kinase Aurora-1 119 294 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi209g00014 Sebi-Chr209 240748 243040 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi209g00014 26 297 CBL-interacting serine-threonine protein kinases AT5G10930 35.125 1.05e-54 182
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK Aur Sebi209g00014 Pkinase 1.6e-73 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi209g00014 K08850 - gmx:100803678 592.038