Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi208g00043 ATGCCACTGGCCCGGCGGTCTTCTGCACCAACGACCGAGTCACCCAACTCGCCCTCCCCTTCCAAGGGCCTAACCGGTTACATACCTTCCGAACTAGGCCTTCTCACTGAACTAAAACGACTTAGCCTCCCACACAACAACCTTCACCAGAAGCATCCTTCAAGCCTCTTCAACGCCACAAAACTCGTCGGAAACCTTCCGGTTGCTGTGAGTTTGGATCTCTGCGATAACAACCTCACCGGAGAAATTCCCCAGGTTGGCTCGAAAGCCTCCAGAGATTTTCCCGAAGATGACCCTGAGAACCCGAACCAGAACCCGAATGCGCTTCAAACGGGTCCGGGTCAAGAGAAGAAGCTGAGAAGTGGGTCGCTTGTTCTTGCTGCCGTGATCTCCGGCGTGTCGGTGACGGGTTGGTGGTTTTGCTGTCGGCGTGGATTCTCCGGCGACGGCGGAGGTGACGGGCGGCGAGGGGTTTGGGTTGGAGTTGGAGGATTTGTTGAGGGCTTCTGCAGTATTGTGGTGGGAAGAGGCAGGAGTGGGATTGTGTACAAGGTGGTCGGTGTCGGAAAAGGGTCTTTCCCGGCGCCGACGGTGGTGGCCGTTCGGCGGCTGAGTGAGGGTGATGATGCCACGTTAAGGTTCAAGGAGTTTGAGTCAGAGGTGGAGGCTATTGGCAGGGTTCGCCACCCCAATGTGGTTCCTTTGAGAGCTTATTACTATGCAAGTGATGAGAAACTGCTCATCACTGATTTCATTCGCAATGGAAGCTTGCACACTGCATTGCACGGTATCACTTCTCACACTGTATTATTTCATTAA 819 0.5433 MPLARRSSAPTTESPNSPSPSKGLTGYIPSELGLLTELKRLSLPHNNLHQKHPSSLFNATKLVGNLPVAVSLDLCDNNLTGEIPQVGSKASRDFPEDDPENPNQNPNALQTGPGQEKKLRSGSLVLAAVISGVSVTGWWFCCRRGFSGDGGGDGRRGVWVGVGGFVEGFCSIVVGRGRSGIVYKVVGVGKGSFPAPTVVAVRRLSEGDDATLRFKEFESEVEAIGRVRHPNVVPLRAYYYASDEKLLITDFIRNGSLHTALHGITSHTVLFH 272
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi208g00043 272 SUPERFAMILY L domain-like 24 85 - -
Sebi208g00043 272 MobiDBLite consensus disorder prediction 85 116 - -
Sebi208g00043 272 SUPERFAMILY Protein kinase-like (PK-like) 173 265 IPR011009 -
Sebi208g00043 272 MobiDBLite consensus disorder prediction 100 116 - -
Sebi208g00043 272 Gene3D Phosphorylase Kinase; domain 1 166 251 - -
Sebi208g00043 272 MobiDBLite consensus disorder prediction 7 24 - -
Sebi208g00043 272 MobiDBLite consensus disorder prediction 1 28 - -
Sebi208g00043 272 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 24 266 IPR046959 -
Sebi208g00043 272 Pfam Protein kinase domain 174 262 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi208g00043 272 Gene3D Ribonuclease Inhibitor 16 94 IPR032675 -
Sebi208g00043 272 ProSiteProfiles Protein kinase domain profile. 168 272 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi208g00043 Sebi-Chr208 1029828 1031007 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi208g00043 22 268 Receptor kinase-like Gene Family AT2G42290 36.193 1.28e-46 163
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Sebi208g00043 Pkinase 2.5e-08 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi208g00043 - - vvo:131595630 201.83