Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi208g00042 ATGGGTTCAAAATTTGCAGCTTCCTCTAACTACTACTTGGCACCTGAGGTGCGCATAGCTGGTGGAAAGTTCACTCAGAAATGTGATGTGTATTCCTTTGGCATAGTGCTGTTAGAACTTTTGACAGGTCGGTTGCCAGATTTAGGACCAGAAAATGATCATAAAGAGCTAGAAAGTTTTGTGAGGAAAGCATTCAGGGAGGAGCATCCCTTATCAGAGATTATAGACCCGGCACTTCTGCCTGAGGTTAATGCTAAAAAGCAAGTTATTGCAGCATTTCATGTTGCACTGAACTGTACAGAACTCGATCCAGAATTGCGACCAAGAATGAGAACAGTGTCTGAGAGCCTTGATCGCATCAAAATACAGTGA 372 0.4301 MGSKFAASSNYYLAPEVRIAGGKFTQKCDVYSFGIVLLELLTGRLPDLGPENDHKELESFVRKAFREEHPLSEIIDPALLPEVNAKKQVIAAFHVALNCTELDPELRPRMRTVSESLDRIKIQ 123
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi208g00042 123 PANTHER LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1 12 121 - -
Sebi208g00042 123 SUPERFAMILY Protein kinase-like (PK-like) 8 115 IPR011009 -
Sebi208g00042 123 Gene3D Transferase(Phosphotransferase) domain 1 3 123 - -
Sebi208g00042 123 Pfam Protein kinase domain 8 113 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi208g00042 123 ProSiteProfiles Protein kinase domain profile. 1 123 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi208g00042 Sebi-Chr208 1028036 1028407 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi208g00042 3 121 Receptor kinase-like Gene Family AT3G57830 61.667 7.76e-45 152
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Sebi208g00042 Pkinase 1.8e-08 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi208g00042 - - vvo:131595630 216.853