Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi208g00027 ATGCCTTCTTCTTCTATTATCCCTGGAAACTACCTAAGCAAGGATTCTGGTGCTTATGATTTAGGTGAATTGGATCAAGCCTTTTTTCTGTATCTTGATGGACAAGCTGACCCATCTAGTGGTCAAGACCAAAGACCAGAGAACTCATCATCATCAGGAATGAGGCCACCACCAACTCTCAACATTTTCCCATCTCAGCCTATGCATGTAGCACCACCACCATCCAATTCAAAGGCTACCTTGGAGATACCTTCTCTACCAAACAATGGTCCCAAGAGACCATCAGAGCCGTCCATGGAGTTGGCCAACGCTCGGAATGAGACTATCTCTGCACCTGAACCACCAAAAACTGTCAAGCGAGAGAGCAATCGCAGCAAGGCTCCAACTTCAAGTTCTGAGCATGAAGGGCCGAAAACCCCCGATCCTAAGACACTGAGAAGGCTTGCTCAGAATAGAGAGGCAGCTAGGAAAAGCAGGCTGAGGAAAAAGGCTTATGTTCAGCAGCTAGAGACTAGTAGGATCAAGCTGAATCAGCTGGAACAAGAACTGCAGCGTGCTAGAGCTCAAGGCATATTAATGGGTGGTGGTGCACTTATGGGAGGAGAACAAGGCATTCCCGTTGGTATGGGTAACATTAGCCCAGATGCTGCCATGTTTGATGTGGAGTATGCGAGGTGGTTAGAGGAGCACCAAAAGCTAGTGGGTGAGCTAAGAGCTGCGCTCCAGGAACACCTCCATGAGAATGAACTTAGGCTATATGTGGAGAATTGCTTAGCTCATTATGACCAAGTGATGAATCTTAAGAGTATAGTAGCAAAGACTGATATATTCCATCTTGTGAATGGGATATGGATGACCCCAATGGAACGATCCTTCATGTGGATCGGTGGCTTCAGGCCATCTCAACTCATTAAGATCATTCTGAGTCAAATTGAGCCTCTTACTGAGCAACAATTACTTGGGATATGTGGGTTGCAACAATCTACACAAGAGGCAGAAGATGCTCTTTCCCAAGGGCTTGAAGCCCTCAATCAATCTGTCTCAAACACTATAACATCTGACTCTTTGAGCTCTCCACCCAATATGGCTAACTACATGGGAACGATGGCTGTGGCCATGAACAAGCTCTCCACTCTTGAAGGCTTTGCGAGACAGGCTGATCATCTGAGGCACCAAACCCTTCACCGTCTGCATCAGCTGCTAACAACACGCCAAGCTGCAAGGTGTTTGGTGGCAATATCTGAATTCTTCCATCGCCTGAGAGCACTGAGTTCCCTGTGGTCGACACGCCCTCGCCAAGAATAG 1305 0.4736 MPSSSIIPGNYLSKDSGAYDLGELDQAFFLYLDGQADPSSGQDQRPENSSSSGMRPPPTLNIFPSQPMHVAPPPSNSKATLEIPSLPNNGPKRPSEPSMELANARNETISAPEPPKTVKRESNRSKAPTSSSEHEGPKTPDPKTLRRLAQNREAARKSRLRKKAYVQQLETSRIKLNQLEQELQRARAQGILMGGGALMGGEQGIPVGMGNISPDAAMFDVEYARWLEEHQKLVGELRAALQEHLHENELRLYVENCLAHYDQVMNLKSIVAKTDIFHLVNGIWMTPMERSFMWIGGFRPSQLIKIILSQIEPLTEQQLLGICGLQQSTQEAEDALSQGLEALNQSVSNTITSDSLSSPPNMANYMGTMAVAMNKLSTLEGFARQADHLRHQTLHRLHQLLTTRQAARCLVAISEFFHRLRALSSLWSTRPRQE 434
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi208g00027 434 FunFam BZIP family transcription factor 142 191 - -
Sebi208g00027 434 ProSiteProfiles DOG1 domain profile. 216 430 IPR025422 GO:0006351|GO:0043565
Sebi208g00027 434 Pfam bZIP transcription factor 143 182 IPR004827 GO:0003700|GO:0006355
Sebi208g00027 434 Coils Coil 162 189 - -
Sebi208g00027 434 Coils Coil 227 247 - -
Sebi208g00027 434 PANTHER TRANSCRIPTION FACTOR TGA9 99 433 - -
Sebi208g00027 434 CDD bZIP_HBP1b-like 143 191 - -
Sebi208g00027 434 Pfam Seed dormancy control 234 308 IPR025422 GO:0006351|GO:0043565
Sebi208g00027 434 Gene3D - 142 192 - -
Sebi208g00027 434 MobiDBLite consensus disorder prediction 32 145 - -
Sebi208g00027 434 MobiDBLite consensus disorder prediction 37 59 - -
Sebi208g00027 434 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 146 161 IPR004827 GO:0003700|GO:0006355
Sebi208g00027 434 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 141 185 IPR004827 GO:0003700|GO:0006355
Sebi208g00027 434 SUPERFAMILY Leucine zipper domain 143 185 IPR046347 GO:0003700|GO:0006355
Sebi208g00027 434 SMART brlzneu 139 192 IPR004827 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi208g00027 Sebi-Chr208 638942 644932 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi208g00027 9 434 Basic region leucine zipper (bZIP) Transcription Factor Gene Family AT5G06839 61.261 0.0 535
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Sebi208g00027 DOG1 1.5e-28 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi208g00027 K14431 - gmx:100799713 681.404