Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi208g00016 ATGCATCCAATTCTGTGTACACTCTCTTACATAACTTCGGTAGCATTTTTATTTCAAGAAAAGCTAATATCCTCTTTGATAGTCCTTGCCAGATTTCATCAGCTTCCTGAATTTGATCAAGGAAAACGAAGCTGCCGAAGGCGCCTAGCTGGCCATAATGAACGTCGGAGAAAGCCCCCACCAAGCTCCTTATTAGCCTCACGTTATGCCAGACTTTCTTCACCTATTTTTGAAAACAATGGCAGAGGTGGTGGTTTTATGATGGAATTTGCTCCATACCCAAAGCTTACTCTGAGAAATGCATCACCAACTCCCAGATCATCTGAGCCTGTTCCAGATAATCACACTACAACACTTACCTGGCAGGCCAACTCACAGACACCATCTGACTTTTTCCTGCAAGACTCAGTGGGTGGGACAAGCTTCCTTGGTCCCAGACATCCTCCAGTGGAAAGTTACACTGAAGTTGCAGACTCAAGCTGTGCTCTCTCTCTTCTGTCAAGTCAAACATGGGGTTCTAGAAACACAACACCAAGTGGTGAGCTGAACAACTTCTTGAATTTCAATGGGACACTCATGACACAACTTGCTGCATCTTCTCCAATTGCAGCCATCCATCAACTTCCAAATGCCTCATGGTATTTCAAAGGTGTTGGTTCTGATAATTGTTCACCCGAGGTTGTCCCTGATCTCGGTCTGGGTCAGATTTCACAGTCTCTTCATAGCCATCCTCCTGGTGAGCTTGATGTGTCACAGCAGAACAGGAGGCATTACATGGATATGGGACAGTCCAGGGCCTGTGAGTCTCCTCACTGGTCACATTAA 825 0.457 MHPILCTLSYITSVAFLFQEKLISSLIVLARFHQLPEFDQGKRSCRRRLAGHNERRRKPPPSSLLASRYARLSSPIFENNGRGGGFMMEFAPYPKLTLRNASPTPRSSEPVPDNHTTTLTWQANSQTPSDFFLQDSVGGTSFLGPRHPPVESYTEVADSSCALSLLSSQTWGSRNTTPSGELNNFLNFNGTLMTQLAASSPIAAIHQLPNASWYFKGVGSDNCSPEVVPDLGLGQISQSLHSHPPGELDVSQQNRRHYMDMGQSRACESPHWSH 274
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi208g00016 274 ProSiteProfiles Zinc finger SBP-type profile. 1 59 IPR004333 GO:0003677
Sebi208g00016 274 PANTHER SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 4 31 247 IPR044817 GO:0003677
Sebi208g00016 274 Pfam SBP domain 30 58 IPR004333 GO:0003677
Sebi208g00016 274 SUPERFAMILY SBT domain 30 64 IPR036893 GO:0003677|GO:0005634
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi208g00016 Sebi-Chr208 434230 435248 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi208g00016 30 269 SBP-box Gene Family AT2G42200 38.868 4.74e-29 111
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF SBP Sebi208g00016 SBP 8.1e-09 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi208g00016 - - gmx:100807165 361.303