Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi208g00013 ATGTATCACTCTTCCCATATGCATAAAACTGAATCCAAATCGAACAGAGCAAATAGTAGTACTGATCTAGCCACGGTTGGAGTATCACAACATCTGAGGTTAAAGGGACAAGACAGCATGAACTTCCAATTCCAACAACATGTGCAGCAAATGTTTGATATTCCTGATTCATTTTTTAAGTCCCCAGAGGCCTTTGATTCACAAAATGTAACAGAAATAACAGCTCAAGGGGGCTCAACTCTGCAGTTCAGAAACTCCTTGGAAACTGTTCATTCTTTCTTGTCCAGTGACAAAGACAGTACCTTTTGTGAAATGTATAGTGGATTTCCTTGCCATGAAGAGCCACTTTATGAGCATTTCACACAAGAACATAGCAAGTTGAATTTCTTCTATTCTCAAGCTGAGGTTGCTTGTGCCACTTCTGGAAACTCTGCTTCTAGTACAGCTCCAATAAGGAAAAACAGAATAAAATGGACTAAAGATCTGCATGAGCAATTTGTTGCTGCTGTCAACAGCCTTGGTGGTCCTCAAAAGGCAAAGCCTAAGGCAGTGCTACTTAAGATGGATTCAAAGTCGCTGACCATATTTCATGTTAAAAGTCACTTGCAGAGAGATATGAAGAAAGACAAGGCAGAGACATGGCCACTGAACTTCAACAGAAAATCTATATGCAAATTGAGGAATCACGACAGTTGCAACGTGAGATTAGGAAGAGCATTCAAGAACAACGAGAGGTACGTACCATAA 747 0.4029 MYHSSHMHKTESKSNRANSSTDLATVGVSQHLRLKGQDSMNFQFQQHVQQMFDIPDSFFKSPEAFDSQNVTEITAQGGSTLQFRNSLETVHSFLSSDKDSTFCEMYSGFPCHEEPLYEHFTQEHSKLNFFYSQAEVACATSGNSASSTAPIRKNRIKWTKDLHEQFVAAVNSLGGPQKAKPKAVLLKMDSKSLTIFHVKSHLQRDMKKDKAETWPLNFNRKSICKLRNHDSCNVRLGRAFKNNERYVP 248
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi208g00013 248 MobiDBLite consensus disorder prediction 1 21 - -
Sebi208g00013 248 SUPERFAMILY Homeodomain-like 151 204 IPR009057 -
Sebi208g00013 248 MobiDBLite consensus disorder prediction 1 15 - -
Sebi208g00013 248 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL7-LIKE 87 219 IPR046955 GO:0003700
Sebi208g00013 248 NCBIfam myb-like DNA-binding domain, SHAQKYF class 153 204 IPR006447 GO:0003677
Sebi208g00013 248 Gene3D - 152 209 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi208g00013 Sebi-Chr208 387746 389568 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi208g00013 145 204 G2-like Transcription Factor Family AT5G06800 62.903 8.23e-20 84.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Sebi208g00013 None None None